Protein: | hlh-1 |
Organism: | Caenorhabditis elegans |
Length: | 320 amino acids |
Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Region A: Residues: [1-131] |
1 11 21 31 41 51 | | | | | | 1 MNTETSTQSA PSDTYDTSIY YNSSPRVTAN DITTLTSFAA PAPQVLDYAN TQYDIYRNQP 60 61 AYYLPSYAPT APTTFYSDFA NFNVTRSQDF ASVPAVANSS DVKPIIIKQE KSTPNATELI 120 121 IQSRVDSQHE D |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
Region A: Residues: [132-225] |
1 11 21 31 41 51 | | | | | | 1 TTTSTAGGAG VGGPRRTKLD RRKAATMRER RRLRKVNEAF EVVKQRTCPN PNQRLPKVEI 60 61 LRSAIDYINN LERMLQQAGK MTKIMEQNQH LQMT |
Detection Method: | |
Confidence: | 16.39794 |
Match: | 1mdyA |
Description: | Myod B/HLH domain |
Matching Structure (courtesy of the PDB): |
Term | Confidence | Notes |
binding | 2.28018660287528 | bayes_pls_golite062009 |
transcription regulator activity | 1.87754990073909 | bayes_pls_golite062009 |
DNA binding | 1.73664400879211 | bayes_pls_golite062009 |
transcription factor activity | 1.6095946900662 | bayes_pls_golite062009 |
nucleic acid binding | 1.57122223638621 | bayes_pls_golite062009 |
protein binding | 0.78099405089238 | bayes_pls_golite062009 |
transcription activator activity | 0.314165294474 | bayes_pls_golite062009 |
Region A: Residues: [226-320] |
1 11 21 31 41 51 | | | | | | 1 QQINGAPPHD YVTSSHFASS SYNPENMFDD DDLTDSDDDR DHHKLGNAVD LRRRNSLDRL 60 61 SRIVASIPNE EAMTDEQLLQ PANDVIDGEK KLEML |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.