| Protein: | oxy-4 |
| Organism: | Caenorhabditis elegans |
| Length: | 457 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for oxy-4.
| Description | E-value | Query Range |
Subject Range |
|
|
480.0 | [0..1] | [448..120] |
|
Region A: Residues: [1-457] |
1 11 21 31 41 51
| | | | | |
1 MEDSGFSGVV RLSNVSDFIA PNLDCIIPLE TRTVEKKKEE SQVNIRTKKP KDKESSKTEE 60
61 KKSVKISLAD CLACSGCITS AETVLVEEQS FGRVYEGIQN SKLSVVTVSP QAITSIAVKI 120
121 GKSTNEVAKI IASFFRRLGV KYVIDSSFAR KFAHSLIYEE LSTTPSTSRP LLSSACPGFV 180
181 CYAEKSHGEL LIPKISKIRS PQAISGAIIK GFLAKREGLS PCDVFHAAVM PCFDKKLEAS 240
241 REQFKVDGTD VRETDCVIST AELLEEIIKL ENDEAGDVEN RSEEEQWLSA LSKGSVIGDD 300
301 GGASGGYADR IVRDFVLENG GGIVKTSKLN KNMFSTTVES EAGEILLRVA KVYGFRNVQN 360
361 LVRKMKTKKE KTDYVEIMAC PGGCANGGGQ IRYETMDERE EKLIKVEALY EDLPRQDDEE 420
421 TWIKVREEWE KLDKNYRNLL FTDYRPVETN VAQVLKW
|
| Detection Method: |  |
| Confidence: | 109.0 |
| Match: | 1c4aA |
| Description: | Fe-only hydrogenase, catalytic domain; Fe-only hydrogenase, N-terminal domain; Fe-only hydrogenase, second domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 1.47874003627413 | bayes_pls_golite062009 |
| NADH dehydrogenase (ubiquinone) activity | 1.31458462821219 | bayes_pls_golite062009 |
| iron-sulfur cluster binding | 1.18054918348653 | bayes_pls_golite062009 |
| metal cluster binding | 1.18054918348653 | bayes_pls_golite062009 |
| NADH dehydrogenase activity | 1.10428419414285 | bayes_pls_golite062009 |
| lamin binding | 0.863386378061341 | bayes_pls_golite062009 |
| NADH dehydrogenase (quinone) activity | 0.778342926116907 | bayes_pls_golite062009 |
| catalytic activity | 0.488483980994331 | bayes_pls_golite062009 |
| oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor | 0.312816353615077 | bayes_pls_golite062009 |
| ferredoxin hydrogenase activity | 0.278768281741128 | bayes_pls_golite062009 |
| oxidoreductase activity, acting on hydrogen as donor, iron-sulfur protein as acceptor | 0.278768281741128 | bayes_pls_golite062009 |
| protein binding | 0.221871950373022 | bayes_pls_golite062009 |
| electron carrier activity | 0.0554226204149908 | bayes_pls_golite062009 |
