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View Structure Prediction Details

Protein: ctl-1
Organism: Caenorhabditis elegans
Length: 497 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ctl-1.

Description E-value Query
Range
Subject
Range
gi|41323499 - gi|41323499|gb|AAR99908.1| catalase [Litopenaeus vannamei]
678.0 [0..1] [496..1]

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Predicted Domain #1
Region A:
Residues: [1-497]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPNDPSDNQL KTYKETYPKP QVITTSNGAP IYSKTAVLTA GRRGPMLMQD VVYMDEMAHF  60
   61 DRERIPERVV HAKGAGAHGY FEVTHDITKY CKADMFNKVG KQTPLLVRFS TVAGESGSAD 120
  121 TVRDPRGFSL KFYTEEGNWD LVGNNTPIFF IRDAIHFPNF IHALKRNPQT HMRDPNALFD 180
  181 FWMNRPESIH QVMFLYSDRG IPDGFRFMNG YGAHTFKMVN KEGNPIYCKF HFKPAQGSKN 240
  241 LDPTDAGKLA SSDPDYAIRD LFNAIESRNF PEWKMFIQVM TFEQAEKWEF NPFDVTKVWP 300
  301 HGDYPLIEVG KMVLNRNVKN YFAEVEQAAF CPAHIVPGIE FSPDKMLQGR IFSYTDTHYH 360
  361 RLGPNYIQLP VNCPYRSRAH TTQRDGAMAY ESQGDAPNYF PNSFRGYRTR DDVKESTFQT 420
  421 TGDVDRYETG DDHNYEQPRQ FWEKVLKEEE RDRLVGNLAS DLGGCLEEIQ NGMVKEFTKV 480
  481 HPDFGNALRH QLCQKKH

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 1000.0
Match: 1tguA
Description: The crystal structure of bovine liver catalase without NADPH
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalase activity 8.51144125131094 bayes_pls_golite062009
peroxidase activity 6.21360523181668 bayes_pls_golite062009
oxidoreductase activity, acting on peroxide as acceptor 6.21360523181668 bayes_pls_golite062009
antioxidant activity 6.04714571701065 bayes_pls_golite062009
oxidoreductase activity 4.53518604474275 bayes_pls_golite062009
catalytic activity 2.21594208202467 bayes_pls_golite062009
binding 1.7977175288758 bayes_pls_golite062009
protein binding 1.4378207235312 bayes_pls_golite062009
hydrolase activity 0.904643040470721 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle