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View Structure Prediction Details

Protein: dbr-1
Organism: Caenorhabditis elegans
Length: 500 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for dbr-1.

Description E-value Query
Range
Subject
Range
gi|6019470, gi|7... - ref|NP_057300.1| debranching enzyme homolog 1 [Homo sapiens], gi|6019470|gb|AAD53327.2| RNA lariat ...
575.0 [0..41] [498..1]

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Predicted Domain #1
Region A:
Residues: [1-277]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSKNPVDEQ PCCGSHEGSH QDPAPETLVV EKEVNNGEKK IRIAVVGCSH GEMDAIYETM  60
   61 TLIEQKNGYK FDLLICCGDY QAVRNYGDLP HMSIPPKYRS LQTFYKYYSG EQKAPVLTLF 120
  121 IGGNHEASGY LCELPNGGWV APNIYYMGFA NCIRFANLRI AGLSGIFSQG DFQFSHYERP 180
  181 SFSERDVKSA YHVRNVDMFR LRQLKSDNEN KISNPIDIML SHDWPGGIPD FGDKEWLFRK 240
  241 KDLFEADHNS GKLGNPSGMK LIYDCRPRYY LAAHLHI

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 5.69897
Match: 2yvtA
Description: No description for 2yvtA was found.

Predicted functions:

Term Confidence Notes
hydrolase activity, acting on ester bonds 2.78838275355792 bayes_pls_golite062009
hydrolase activity 2.76303513476374 bayes_pls_golite062009
catalytic activity 1.39852585255405 bayes_pls_golite062009
binding 1.24690422779109 bayes_pls_golite062009
phosphoprotein phosphatase activity 1.23036240099336 bayes_pls_golite062009
protein serine/threonine phosphatase activity 1.1761660507432 bayes_pls_golite062009
phosphoric ester hydrolase activity 0.899406797746366 bayes_pls_golite062009
phosphatase activity 0.76188635342041 bayes_pls_golite062009
protein binding 0.184079020957384 bayes_pls_golite062009

Predicted Domain #2
Region A:
Residues: [278-500]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 AFAALVPHKG SGSGRPQPTR FLSLDKPIPG RKFMQALELN VADDAKLELS YDPQWLAILR  60
   61 NTDLLTTGTK EQLILPDMAS NRPCVYERKD FRPTAEELKE IEKLGDLTIR TDSFQQTAPP 120
  121 LKEITESSKN VPPSAYYRNP QSAEFCQWLG IRDLNQMLVE KTSEHVGTPY YMMTQDDANA 180
  181 KPNQDDVDFG DEDFVIDRGH TSDEPEAKKS RLDEDKFEAV PSE

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 107.0
Match: PF05011.4
Description: No description for PF05011.4 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle