| Protein: | pnk-1 |
| Organism: | Caenorhabditis elegans |
| Length: | 449 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for pnk-1.
| Description | E-value | Query Range |
Subject Range |
|
|
598.0 | [0..1] | [449..1] |
|
Region A: Residues: [1-107] |
1 11 21 31 41 51
| | | | | |
1 MGHTSVTSSR RISPRGSPPN LRRTPPKIRK VLVLREKRAA ATEDQIMDDL LLSSKLKRVD 60
61 SATGSVSPRV CAADALPTTT PAASTALRQT QKAPKTPYVI LPASDTF
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [108-449] |
1 11 21 31 41 51
| | | | | |
1 EKFRKTSRVS VDIGGTLIKV VYSSVMDEEL PEESLNGHTR KYAYEDGKRV LVNFKKFTDM 60
61 DRFINFLKEV WTDRKRGDVI HCTGGGSYKY SEIIMKELGV RLQRTDEMRS LIFGVNFLLS 120
121 TNVDESFTYH HDAIGRNKFQ YRPIAADLIY PFLLVNIGTG ISILKVDSPT SYERVGGSSM 180
181 GGGTFMGLGS LLTPAQNFDE LLEMANRGDH RNVDKLVCDI YGGAYDELGL KADLIAGSMA 240
241 KCNRFEETTK KQQHKPEDIA KSLLLMVSNN IGQMAYLYGT RYNLKRIYFG GYFIRQDPIT 300
301 MRTLSFAINY WSKGEIEALY LKHEGYLGAM GSFLDEDGKL DD
|
| Detection Method: | |
| Confidence: | 128.0 |
| Match: | 2i7nA |
| Description: | No description for 2i7nA was found. |
| Term | Confidence | Notes |
| structural constituent of cytoskeleton | 2.46121037473545 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 2.20983242331685 | bayes_pls_golite062009 |
| binding | 1.92007657015464 | bayes_pls_golite062009 |
| pantothenate kinase activity | 1.12808997366738 | bayes_pls_golite062009 |
| actin binding | 1.03829083423378 | bayes_pls_golite062009 |
| structural molecule activity | 0.963253603902027 | bayes_pls_golite062009 |
| hydrolase activity | 0.921698825968978 | bayes_pls_golite062009 |
| protein binding | 0.856838411407636 | bayes_pls_golite062009 |
| kinase activity | 0.436497417645497 | bayes_pls_golite062009 |
| phosphotransferase activity, alcohol group as acceptor | 0.342031925172053 | bayes_pls_golite062009 |
| carbohydrate kinase activity | 0.322729811262666 | bayes_pls_golite062009 |
| myosin binding | 0.31501932970343 | bayes_pls_golite062009 |
| catalytic activity | 0.296484721581333 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 0.267232202923286 | bayes_pls_golite062009 |
| transcription regulator activity | 0.145473164813666 | bayes_pls_golite062009 |
| nucleic acid binding | 0.101675282305395 | bayes_pls_golite062009 |
| unfolded protein binding | 0.0304569608189402 | bayes_pls_golite062009 |
