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View Structure Prediction Details

Protein: CE28980
Organism: Caenorhabditis elegans
Length: 111 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE28980.

Description E-value Query
Range
Subject
Range
gi|109483017 - gi|109483017|ref|XP_001068383.1| PREDICTED: similar to tubulin cofactor a (predicted) [Rattus norveg...
110.0 [0..9] [110..18]

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Predicted Domain #1
Region A:
Residues: [1-111]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTQADQLKA LRIKTGTVQR LVKEVAYYEK QVVKEEQKAA QLAADATNED EEYVAKKSKD  60
   61 IVKETANMVR DSQSRLQKAV ADLRESIASG NYPEEAAEFV NAKTLVDSIS A

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 20.69897
Match: 1h7cA
Description: Tubulin chaperone cofactor A
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
chaperone binding 1.47792074338377 bayes_pls_golite062009
binding 1.01243510413122 bayes_pls_golite062009
protein binding 0.201520398401233 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle