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View Structure Prediction Details

Protein: CE28902
Organism: Caenorhabditis elegans
Length: 605 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE28902.

Description E-value Query
Range
Subject
Range
gi|92297 - gi|92297|pir||A41009 glutaminase (EC 3.5.1.2) precursor, mitochondrial - rat
556.0 [0..8] [570..104]

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Predicted Domain #1
Region A:
Residues: [1-149]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTSKPTTQKS VMYRIPSERT LESLHEMIGS RMSKMSLKNT LRGISNPYER DENEGSEDMI  60
   61 FELFKIPNKN EASIGKLLTV LRQLGLRDDD PRLVPMMEKI KDFEKIAEEK CSEATEQKHW 120
  121 KLTKEQFKEC IAPSIDIVSR ALQTDMVIP

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 0.95
Match: 2amiA
Description: Solution Structure Of The Calcium-loaded N-Terminal Sensor Domain Of Centrin
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [150-236]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NWVTFVDQIR TLFNECKEIR EGQVATYIPQ LARQSPNLWA VSLCTVDGQR ASFGDVKHPF  60
   61 CVQSVSKAFN YAIVASDLGA DVVHSYV

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 64.221849
Match: 2pbyA
Description: No description for 2pbyA was found.

Predicted Domain #3
Region A:
Residues: [237-605]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GQEPSGRLFN EICLDSTNKP HNPMVNSGAI VITSLIKSKT NMADRFDFVL NQYRKIAGNE  60
   61 FIGFNNATFL SERATADRNY ALSYFMKENR CFPKETESLT DALDFYFQLC SVEVTCESLA 120
  121 VMASTLANGG VCPITNETCV DPNPCRDVLS LMYSCGMYDA SGQFSFNVGL PAKSGVSGAM 180
  181 IVVVPNVMGI CLFSPPLDSL GNSCRGVAFC KKLVSTFNFH NYDCLVHNSN IKSDPRRRDI 240
  241 RERDRLIPVF HVARAGDLPT MRRLYMQGED LNTSDHDDRT VLHIAATEGY ETMIKFLVNV 300
  301 AKVDVDKKDR WGRTPLDEAK FFKHDHVSRF LEKAMKRPEQ HRKDSVSSLD TDDEIDDDGF 360
  361 PEKPSFTID

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 64.522879
Match: 1n11A
Description: Ankyrin-R
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 1.62593430784178 bayes_pls_golite062009
protein binding 1.39636607384619 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle