| Protein: | vab-3 |
| Organism: | Caenorhabditis elegans |
| Length: | 269 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for vab-3.
| Description | E-value | Query Range |
Subject Range |
|
|
144.0 | [0..6] | [269..192] |
|
Region A: Residues: [1-97] |
1 11 21 31 41 51
| | | | | |
1 MRSIANTNED QKPPTEPEDD AAARMRLKRK LQRNRTSFTQ VQIESLEKEF ERTHYPDVFA 60
61 RERLAQKIQL PEARIQVWFS NRRAKWRREE KMRNKRS
|
| Detection Method: |  |
| Confidence: | 22.39794 |
| Match: | 1fjlA |
| Description: | Paired protein |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.334577365229545 | bayes_pls_golite062009 |
| transcription regulator activity | 0.0696342306231097 | bayes_pls_golite062009 |
|
Region A: Residues: [98-269] |
1 11 21 31 41 51
| | | | | |
1 SGTMDSSLSN GTPTPTPGSV TGSNMTNPIG SPASTPNRFP SNNSANLPTT NFVPQTSQMY 60
61 AGLSQPAMDP YSFGIANGFS MAPYPQVTDF QPHHMFQGRS PYDFPYPRMP TNGHGFQQSM 120
121 SPATTAVGDI PTLSSGMSLP VSAVLNSIDP SLTHSQMHEL SDLTQEHYWR PQ
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
