| Protein: | CE27481 |
| Organism: | Caenorhabditis elegans |
| Length: | 364 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE27481.
| Description | E-value | Query Range |
Subject Range |
|
|
448.0 | [0..8] | [364..4] |
|
Region A: Residues: [1-127] |
1 11 21 31 41 51
| | | | | |
1 MTNKEKPIKH LVIDTCAIIA NRNLHALADH YYAPPQILDE LRSSAARKLW NTLPFEVTLR 60
61 EPTQTALRAV IDASKTTGDF QSLSMVDIKM IALTYDLHRQ YVAENDVAET TEDDEKKNIE 120
121 DLSAKVE
|
| Detection Method: |  |
| Confidence: | 1.89 |
| Match: | 1o4wA |
| Description: | Hypothetical protein AF0591 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| exonuclease activity | 2.20884893250825 | bayes_pls_golite062009 |
| binding | 1.86375021779651 | bayes_pls_golite062009 |
| exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters | 1.2490597933903 | bayes_pls_golite062009 |
| DNA binding | 1.20124609530471 | bayes_pls_golite062009 |
| nucleic acid binding | 1.09430328971825 | bayes_pls_golite062009 |
| 3'-5' exonuclease activity | 0.948612547993755 | bayes_pls_golite062009 |
| nuclease activity | 0.932217848952722 | bayes_pls_golite062009 |
| endodeoxyribonuclease activity | 0.620146212680627 | bayes_pls_golite062009 |
| deoxyribonuclease activity | 0.536819960055588 | bayes_pls_golite062009 |
| hydrolase activity, acting on ester bonds | 0.457405908807867 | bayes_pls_golite062009 |
| protein binding | 0.388252010955945 | bayes_pls_golite062009 |
| flap endonuclease activity | 0.28412745918891 | bayes_pls_golite062009 |
| endonuclease activity | 0.148170166509108 | bayes_pls_golite062009 |
|
Region A: Residues: [128-224] |
1 11 21 31 41 51
| | | | | |
1 QVTVGENTED TKEEEIEENE ESEDSAVSEG SESSESSESF DEDGWITQDN IEETLKKLGA 60
61 FEIEENMLVG CLTTDFALQN VLLAMNLSLV SLSGYRI
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [225-364] |
1 11 21 31 41 51
| | | | | |
1 RKLKSFVLRC RTCFSTTSVM TKEFCPACGH KTLHKCAVSV DEDGNQQLHI NWNRMANRRG 60
61 LVYTLANPKG GKHATNERLF EDQPMPHMRM AKIHMDPLAD GPFSVHDVTS RSAMLGVRTI 120
121 NNRAKQNRNP NESKRGGRRK
|
| Detection Method: | |
| Confidence: | 25.0 |
| Match: | 2conA |
| Description: | Solution Structure of RSGI RUH-035, a Zn-ribbon module in Mouse cDNA |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 2.07200237133183 | bayes_pls_golite062009 |
| RNA binding | 1.94349729191855 | bayes_pls_golite062009 |
| protein binding | 0.567759936480502 | bayes_pls_golite062009 |
| nucleic acid binding | 0.493571954231014 | bayes_pls_golite062009 |
