YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: CE27373
Organism: Caenorhabditis elegans
Length: 549 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE27373.

Description E-value Query
Range
Subject
Range
gi|187030410, gi... - gi|39590368|emb|CAE66107.1| Hypothetical protein CBG11327 [Caenorhabditis briggsae], gi|187030410|em...
gi|157759948 - gi|157759948|ref|XP_001672316.1| Hypothetical protein CBG11327 [Caenorhabditis briggsae AF16]
351.0 [0..1] [549..1]

Back

Predicted Domain #1
Region A:
Residues: [1-138]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALANWLTPV EPECDNDDSP AVEEILGRIE DVPPGTKKMF EVRDRKVLVI NDEGRIYAIN  60
   61 GLCSHYNFSL ENGTYAKGRI RCPLHGACFN VRSGDIEDYP GFDSLHSYVV TVNDGNLIIK 120
  121 TTEKKLGSDR RIRHLPKM

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 15.0
Match: 1ww9A
Description: Crystal structure of the terminal oxygenase component of carbazole 1,9a-dioxygenase, a non-heme iron oxygenase system catalyzing the novel angular dioxygenation for carbazole and dioxin
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
ubiquinol-cytochrome-c reductase activity 6.1967513598129 bayes_pls_golite062009
oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor 6.1967513598129 bayes_pls_golite062009
oxidoreductase activity, acting on diphenols and related substances as donors 5.66776915951861 bayes_pls_golite062009
hydrogen ion transmembrane transporter activity 3.88156638601211 bayes_pls_golite062009
monovalent inorganic cation transmembrane transporter activity 3.73845396527802 bayes_pls_golite062009
oxidoreductase activity 3.19845820927381 bayes_pls_golite062009
inorganic cation transmembrane transporter activity 3.1835578543172 bayes_pls_golite062009
electron carrier activity 2.99570246405422 bayes_pls_golite062009
cation transmembrane transporter activity 2.89446748006871 bayes_pls_golite062009
ion transmembrane transporter activity 2.6893938608151 bayes_pls_golite062009
oxidoreductase activity, acting on other nitrogenous compounds as donors 2.10394407031598 bayes_pls_golite062009
binding 1.72571699341388 bayes_pls_golite062009
protein binding 1.42812507064708 bayes_pls_golite062009
catalytic activity 0.746741393172769 bayes_pls_golite062009
oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen 0.40898590798487 bayes_pls_golite062009

Predicted Domain #2
Region A:
Residues: [139-549]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KQCNDRPVVI IGGGVATATF IEHSRLNGLI TPILVISEES LPPYDRVLLS KKPAATGEDI  60
   61 RLRKDDAFYE ERNVKFLLKT SVIAVNHKSR EVSLSNGETV VYSKLIIATG GNVRKLQVPG 120
  121 SDLKNICYLR KVEEANIISN LHPGKHVVCV GSSFIGMEVA SALAEKAASV TVISNTPEPL 180
  181 PVFGSDIGKG IRLKFEEKGV KFELAANVVA LRGNDQGEVS KVILENGKEL DVDLLVCGIG 240
  241 VTPATKFLEG SGIKLDNRGF IEVDEKFRTN ISYIFAMGDV VTAPLPLWDI DSINIQHFQT 300
  301 AQAHGQHLGY TIVGKPQPGP IVPYFWTLFF FAFGLKFSGC NQGSTKEYTN GDPETGTFIR 360
  361 YFLKKDKVVA VAAGGPSSVA SQFAEIFKKG IEVTLKDLKN SSDHTWGHLL L

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 60.69897
Match: 1q1rA
Description: Crystal Structure of Putidaredoxin Reductase from Pseudomonas putida
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
oxidoreductase activity, acting on NADH or NADPH 6.31162710673112 bayes_pls_golite062009
oxidoreductase activity 4.83215507169904 bayes_pls_golite062009
oxidoreductase activity, acting on sulfur group of donors 4.48151296542899 bayes_pls_golite062009
antioxidant activity 3.99666840824738 bayes_pls_golite062009
oxidoreductase activity, acting on sulfur group of donors, NAD or NADP as acceptor 3.14220680303959 bayes_pls_golite062009
dihydrolipoyl dehydrogenase activity 2.64996407196586 bayes_pls_golite062009
NADH dehydrogenase activity 2.52849995398093 bayes_pls_golite062009
catalytic activity 2.35839632763616 bayes_pls_golite062009
disulfide oxidoreductase activity 1.87417564758524 bayes_pls_golite062009
hydrogen ion transmembrane transporter activity 1.51669656835992 bayes_pls_golite062009
binding 1.50672625307126 bayes_pls_golite062009
oxygen-dependent protoporphyrinogen oxidase activity 1.40095976457767 bayes_pls_golite062009
monovalent inorganic cation transmembrane transporter activity 1.38559418221892 bayes_pls_golite062009
protein binding 1.21627488765992 bayes_pls_golite062009
glutathione disulfide oxidoreductase activity 1.03742390358385 bayes_pls_golite062009
peptide disulfide oxidoreductase activity 1.03742390358385 bayes_pls_golite062009
glutathione-disulfide reductase activity 0.99066334151721 bayes_pls_golite062009
inorganic cation transmembrane transporter activity 0.89753364903289 bayes_pls_golite062009
thioredoxin-disulfide reductase activity 0.726677331033932 bayes_pls_golite062009
cation transmembrane transporter activity 0.694937108363567 bayes_pls_golite062009
NADPH-adrenodoxin reductase activity 0.684108511779641 bayes_pls_golite062009
ion transmembrane transporter activity 0.535357395213029 bayes_pls_golite062009
oxidoreductase activity, acting on the CH-CH group of donors 0.36771673037999 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle