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View Structure Prediction Details

Protein: bath-44
Organism: Caenorhabditis elegans
Length: 390 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for bath-44.

Description E-value Query
Range
Subject
Range
bath-44 - status:Confirmed UniProt:Q95QX2 protein_id:AAL00851.1
257.0 [0..1] [390..1]

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Predicted Domain #1
Region A:
Residues: [1-173]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDNSLMQMRH AADSWSTSEV RSLVHKHMWT IRGFSQLECR YLETSAKIKD ITVPLTHQPS  60
   61 SSGGLPELPD ITFRIRLHPQ GNKESNKDFT FFQCFTNQAT TTTTPTFRAK FKFTVFNQRT 120
  121 EETPTTVYSG TQQLHGYFEY IRREVLVGHV QPADDLILCL TITITFDTVT KAA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 18.30103
Match: 2cr2A
Description: Solution structure of N-terminal domain of speckle-type POZ protein
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 2.27961770997634 bayes_pls_golite062009
protein binding 1.74340583625887 bayes_pls_golite062009
transcription regulator activity 1.31204855886285 bayes_pls_golite062009
nucleic acid binding 1.07240204386411 bayes_pls_golite062009
DNA binding 0.996677220619186 bayes_pls_golite062009
catalytic activity 0.00622013180681097 bayes_pls_golite062009

Predicted Domain #2
Region A:
Residues: [174-313]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QNTRSVPPEL PMPSDVTKDL ENLYRSGKHA DFTLVVEERE LKAHKAILAA RSPVFAAMME  60
   61 PHTAEAQNSR AILRDIDYEV VQAILYYIYT GTCTNMGGNA LDILAAAERF ALPGLKNIAE 120
  121 VAMRNGLATE TVCKNLAFAE 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 17.045757
Match: 2nn2A
Description: No description for 2nn2A was found.

Predicted Domain #3
Region A:
Residues: [314-390]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYGLVDFKKE AIKYICMNAN AVINSEGFLR LSRQNPDLIV DIMTVLVNER HNSPSCFSLD  60
   61 GTLEPASKRA RMTETNL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 7.69897
Match: 2eqxA
Description: No description for 2eqxA was found.

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