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View Structure Prediction Details

Protein: daf-28
Organism: Caenorhabditis elegans
Length: 97 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for daf-28.

Description E-value Query
Range
Subject
Range
gi|39597006, gi|... - gi|39597006|emb|CAE59233.1| Hypothetical protein CBG02554 [Caenorhabditis briggsae], gi|187037316|em...
gi|157751890 - gi|157751890|ref|XP_001679657.1| Hypothetical protein CBG02554 [Caenorhabditis briggsae AF16]
109.0 [0..4] [93..2]

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Predicted Domain #1
Region A:
Residues: [1-97]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNCKLIAIFA VLVLSVSAHL GAQAAAANFK AEGPLSRAVR VPGVAVRACG RRLVPYVWSV  60
   61 CGDACEPQEG IDIATQCCTY QCTAEYIQTA CCPRLLL

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.32
Match: 3lriA
Description: Insulin-like growth factor
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
insulin receptor binding 2.7278725657614 bayes_pls_golite062009
insulin-like growth factor receptor binding 2.52789753864303 bayes_pls_golite062009
receptor binding 1.96314913282044 bayes_pls_golite062009
binding 1.53606661868923 bayes_pls_golite062009
protein binding 1.03308976416246 bayes_pls_golite062009
growth factor activity 0.882616311405838 bayes_pls_golite062009
protein complex binding 0.391427446215436 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
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