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View Structure Prediction Details

Protein: pho-9
Organism: Caenorhabditis elegans
Length: 477 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for pho-9.

Description E-value Query
Range
Subject
Range
gi|73990573 - gi|73990573|ref|XP_542782.2| PREDICTED: similar to acid phosphatase, prostate isoform 1 [Canis famil...
296.0 [0..12] [337..236]

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Predicted Domain #1
Region A:
Residues: [1-335]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIYRLLFLYF SVVHAELEMV QVLVRHGDRA PSFTYPLDEF NVAEHFPRGY SQLTQRGFRQ  60
   61 AKEVGVFLRN QYKDLIDGFD RKETLIRSSD KDRCIETAMG ITQTLFPDDI VPVHTYSHYK 120
  121 HDLLLKPNSV RCRRVDELVN ADKSWLSAQV DIEHRDLFSL LSQKTGWHVT GSKISDVFNV 180
  181 LYRKHANGVA QPDWVNHVLA NVTELKRQYR SIQFNSDEKS KMRTGYLLGQ ITKDMVHREE 240
  241 TGRKMIVYAT HDATVTSMMY SLGVSDHQLI PYTAALIVEL HRLNGKSFVK VSLQLEVVKS 300
  301 TVGLGLGLSS DLGLGFGLGL GLGSGLSHMI GCGSG

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 77.522879
Match: 1nd5A
Description: Prostatic acid phosphatase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 1.20498084332879 bayes_pls_golite062009
hydrolase activity 0.320371925004577 bayes_pls_golite062009
binding 0.016624189888955 bayes_pls_golite062009

Predicted Domain #2
Region A:
Residues: [336-477]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QGLGIGLGLI LGTGLGLGLK LGFGLSHMIG FGSGQGLGLG LGLGLGLDIL NRSSPESAPR  60
   61 ELRLPGCDVL CPMETYQEFV STRIISNKEE HDVICQNFEA PEIELPSQEL PKNLPEEDHL 120
  121 FSTLITVGSL SYDLYANLKA KN

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 2.56
Match: 1nd5A
Description: Prostatic acid phosphatase
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle