| Protein: | CE21464 |
| Organism: | Caenorhabditis elegans |
| Length: | 670 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE21464.
| Description | E-value | Query Range |
Subject Range |
|
|
409.0 | [0..62] | [666..13] |
|
Region A: Residues: [1-201] |
1 11 21 31 41 51
| | | | | |
1 MHHFSTGSSS AIIASSSSSS SSSNGYGHSP RDLLTGAAVA NGGGGGFGGV AGVAFATTSP 60
61 PTPVNLDVQR IDCTDETTVV MVKLTDEMFA ALQESQRSGK PLRINVNDKE GRVEIGDGTA 120
121 SSKTNNTFYF QKQTVPEQTD TLVHSGGGVR NVGTYKTKYQ IQATDRSFQE TKKRAELRAE 180
181 VEKSRGTKQM KKSGVTSSSS R
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [202-399] |
1 11 21 31 41 51
| | | | | |
1 YHNSSNSTPR SMNSAPNSSR VSPSFMSSSS SKASTSHVTT NNSKGTPNNG SESKKIDMTP 60
61 QLMKHSIKKR IIHLIVTQKY SNWEEVYKKL KSDGLPEEKD EIEKIRSCVE EVSETRPEMS 120
121 VMSLRTSFLS EVDQRWMFFN QEEKSHVRRL CNSGSRVGPT DNNFAPLRKK GMERITASSK 180
181 TEKDKVKEKL EEAAKIPS
|
| Detection Method: | |
| Confidence: | 12.69897 |
| Match: | 2doaA |
| Description: | No description for 2doaA was found. |
| Term | Confidence | Notes |
| binding | 0.835523092977445 | bayes_pls_golite062009 |
| transcription regulator activity | 0.4843036104266 | bayes_pls_golite062009 |
| nucleic acid binding | 0.37117756729668 | bayes_pls_golite062009 |
| DNA binding | 0.3118855114645 | bayes_pls_golite062009 |
|
Region A: Residues: [400-556] |
1 11 21 31 41 51
| | | | | |
1 PPKDQKSLPS IVEEDDYYTA PPEPANKRRA HNLAPPPPPP VQVVTPQTTS SQTETGPLPP 60
61 KRTKRPESSS PQLERSSQPA SKLNPIKLAA TIAMQPIPKC DPPPPPPSRD TYHHNVASVA 120
121 VNGGGSTASS RVSSPASSLS SPSQPSCNWE KQFGDIK
|
| Detection Method: | |
| Confidence: | 1.38 |
| Match: | 2j63A |
| Description: | No description for 2j63A was found. |
|
Region A: Residues: [557-670] |
1 11 21 31 41 51
| | | | | |
1 TLSEAEAYFK QFHKEYPLYM ECHEMLTKVS SEFRGLEVKL LTAVALSKTS PSPQNMQNVK 60
61 QIEKNIQNRY AHFEKDPEFM KARQRHTDLR SKLNVLKTRI GSWEKMRRQS STNV
|
| Detection Method: | |
| Confidence: | 30.39794 |
| Match: | 1wpaA |
| Description: | 1.5 Angstrom crystal structure of human occludin fragment 413-522 |
Matching Structure (courtesy of the PDB): |
|
