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View Structure Prediction Details

Protein: CE20475
Organism: Caenorhabditis elegans
Length: 330 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE20475.

Description E-value Query
Range
Subject
Range
gi|15643051, gi|... - gi|4980780|gb|AAD35370.1|AE001710_5 aldose 1-epimerase [Thermotoga maritima MSB8], gi|15643051|ref|N...
gi|7445539 - pir||H72395 probable aldose 1-epimerase (EC 5.1.3.3) - Thermotoga maritima (strain MSB8)
359.0 [0..1] [329..20]

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Predicted Domain #1
Region A:
Residues: [1-330]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASGFIEIAN KQGLTATLLP FGATLAKLTF PDKNGKNQDL VLGFDTIDEF EKDAASIGKT  60
   61 VGRVANRIKN STLHFDGKQY TMTPNNGPHY LHGGPNGLGY RKWEVVRHAP ESVSFSVRAN 120
  121 EQDDGLPGDA KIDVTYTVND RNQLIIEHHA TCDTPGLLAL TNHAYWNLDG SDTVAEHFLE 180
  181 MEADEFVEVD DTFCPTGAIR SVTDTGFDFR SGKQLKESGK DAEELLDLDN DLVITKKTPP 240
  241 STPSTYLRFW SEKSGIELSI TTSYPVIHLY ASKFLDCKGK KGEHYKANKA LAIEPQFHSA 300
  301 APNFDHFPDV SLRPGDHYCQ EIVYTFSHVN 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 80.69897
Match: 1lurA
Description: Aldose 1-epimerase homologue
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
aldose 1-epimerase activity 2.85100059704396 bayes_pls_golite062009
catalytic activity 0.770933849734279 bayes_pls_golite062009
racemase and epimerase activity, acting on carbohydrates and derivatives 0.68102716507433 bayes_pls_golite062009
racemase and epimerase activity 0.473636146090495 bayes_pls_golite062009
UDP-glucose 4-epimerase activity 0.46846097606394 bayes_pls_golite062009
binding 0.381228414514023 bayes_pls_golite062009
isomerase activity 0.106573908779409 bayes_pls_golite062009
protein binding 0.078592895113726 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle