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View Structure Prediction Details

Protein: CE19798
Organism: Caenorhabditis elegans
Length: 533 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE19798.

Description E-value Query
Range
Subject
Range
gi|76681309 - gi|76681309|ref|XP_582629.2| PREDICTED: similar to CWF19-like protein 1 isoform 1 [Bos taurus]
448.0 [0..1] [531..1]

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Predicted Domain #1
Region A:
Residues: [1-222]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATQQAKILC CGDVNGNFVE LIKKISTTEK KNGPFDSLFC VGEFFGDDDD SNEKVINGNI  60
   61 EFPIPTYILG PANPRYSYLY PEESIEFSSN LTYLGKKGLL NTASGLQIAY LSGVEGSSKD 120
  121 LSCFDKADVE ELLIPLGTQV GFSGTDILLT SVWPADIARH SHNQPSKPQP GSVLLSKLAA 180
  181 HLKPRYHFAG LGVHYERQPY RNHRVLLEPA RHTTRFIGLA AI

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 24.30103
Match: 2hy1A
Description: No description for 2hy1A was found.

Predicted functions:

Term Confidence Notes
hydrolase activity, acting on ester bonds 1.41093788491161 bayes_pls_golite062009
catalytic activity 1.39852585255405 bayes_pls_golite062009
phosphoprotein phosphatase activity 1.23036240099336 bayes_pls_golite062009
protein serine/threonine phosphatase activity 1.1761660507432 bayes_pls_golite062009
hydrolase activity 1.11229928187243 bayes_pls_golite062009
phosphoric ester hydrolase activity 0.899406797746366 bayes_pls_golite062009
binding 0.852545739165539 bayes_pls_golite062009
phosphatase activity 0.76188635342041 bayes_pls_golite062009
protein binding 0.0526875710450829 bayes_pls_golite062009

Predicted Domain #2
Region A:
Residues: [223-441]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GNPEKQKWLY ACNVKPMRKM EKEELTAQPP NASEFPYREL LEEIAAKETL SRMNGNGQRP  60
   61 EGSQYRFEMG GAEDGAGNGR KRHNDGGNDG PRNKQPVGPC WFCLSNVDAE KHLVVAIGNK 120
  121 CYAAMPKGPL TEDHVMVLSV GHIQSQVSAP VEVRDEIEKF KSAFTLMANK QGKALVTFER 180
  181 NFRTQHLQVQ MVMIDKSSSK ALKSSFTTAA ACAGFELVT

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 6.69897
Match: 1hxqA
Description: Galactose-1-phosphate uridylyltransferase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
nucleic acid binding 1.24536295645879 bayes_pls_golite062009
binding 1.12315862086587 bayes_pls_golite062009
catalytic activity 0.096119422680995 bayes_pls_golite062009
protein binding 0.0847290693390839 bayes_pls_golite062009

Predicted Domain #3
Region A:
Residues: [442-533]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGPDESLLDM VNEGCPYFVA ELPDGSKLFT RSMKGFPLHF GREVLASTPI LDCEDKVDWK  60
   61 ACVLAKEKEV ELVNKLKSDF KPFDFTAEDD SD

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 45.920819
Match: PF04676.5
Description: No description for PF04676.5 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle