Protein: | puf-3 |
Organism: | Caenorhabditis elegans |
Length: | 502 amino acids |
Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for puf-3.
Description | E-value | Query Range |
Subject Range |
|
429.0 | [0..20] | [501..597] |
Region A: Residues: [1-132] |
1 11 21 31 41 51 | | | | | | 1 MSQNTGSSNL GRYYESPPTA TEARGTFGGC FNANSSTNIW TPNRKVDSSM GFRSSSPTPQ 60 61 SAWAPNRQGF GGQFSKWRTS TPMTTPARYP QQAVRLIDLE NNASFSKSLN STTRSHKCTL 120 121 PIWAGDGEGN VS |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [133-502] |
1 11 21 31 41 51 | | | | | | 1 DSVTLQDVLA NDALVEFATD KNGCRFLQEH YPTENDNDVH QKLFRKLVED RAIFLSLCSN 60 61 MFGNFFVQRV LECSNTEEQE ILTEHLATDL YNLCLDKSAC RVIQLAIQKL DVHLATRLSL 120 121 ELRDTHLVRL SIDQNGNHVI QKIVKTLPVS SWTFLVDFFA DDDNLIHVCQ DKYGCRVIQS 180 181 TVETLSTDQY AQCYQHRVIL LRSLMAGVTR NCTQLASNEF ANYVVQHVIK CGDALAVYRD 240 241 IIIEQCLLQN LLSMSQEKYA SHVVEVAFEC APYRLVAEMM NEIFEGYIPH PDTNRDALDI 300 301 LLFHQYGNYV VQQMIQTCVL GQNARDQKQS EMYGMWLEKI HGRVMRNAHR LERFSSGKKI 360 361 IEALQSMSLY |
Detection Method: | |
Confidence: | 104.0 |
Match: | 1ib2A |
Description: | Pumilio 1 |
Matching Structure (courtesy of the PDB): |
Term | Confidence | Notes |
binding | 1.72717267135753 | bayes_pls_golite062009 |
protein transporter activity | 1.12211290620813 | bayes_pls_golite062009 |
protein binding | 1.01840651819417 | bayes_pls_golite062009 |
transporter activity | 0.89694340608107 | bayes_pls_golite062009 |
substrate-specific transporter activity | 0.40908371617242 | bayes_pls_golite062009 |