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View Structure Prediction Details

Protein: CE18241
Organism: Caenorhabditis elegans
Length: 549 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE18241.

Description E-value Query
Range
Subject
Range
gi|157747681 - gi|157747681|ref|XP_001668935.1| Hypothetical protein CBG12724 [Caenorhabditis briggsae AF16]
gi|39595773, gi|... - gi|39595773|emb|CAE67276.1| Hypothetical protein CBG12724 [Caenorhabditis briggsae], gi|187029317|em...
426.0 [0..1] [549..1]

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Predicted Domain #1
Region A:
Residues: [1-164]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPNSKKSKKG GDQQHVTIVP VEPVKGENVD TVAYSSRSRI SGESGHLIAD VQSPHAKKHR  60
   61 IIFDRDHNVF EFRLLDGSAK HIIVYRLDEL LSTTCYPFKI KNGVPIIPTK PTTSDKTLYF 120
  121 NFVYKKDKQK WRLKQIPVIF YTTSERDYWH SLIDTTLRRV KNRP

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 7.30103
Match: 1r79A
Description: Solution Structure of The C1 Domain of The Human Diacylglycerol Kinase Delta
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 0.0980674097362609 bayes_pls_golite062009

Predicted Domain #2
Region A:
Residues: [165-549]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KNIIIFINPF GGNGKAQKIF KDNVDAFFWL TPGLRYKVVL TERANHARDY IVEMPPEQWS  60
   61 AIDGLVSVGG DGLFNELLSG ALLRTQTDAG RNIDNPSSHL VTPHIRFGII GAGSANSIVS 120
  121 TVHETNDHAT SAVHIAIGSE CNVDVCTVHQ HQKLIRISAN AISYGWLGDV LRDSEEYRCL 180
  181 GPIRYQWSAL RTTIRHPIYR GMVQFSLSHK ENVNPKDQLP PCLEPCPVCM KPQGNDKYDY 240
  241 HWHAEFTHVI CCVIPTVTPF TPYGLAPFTG IGDGTLDLAL VPRISRFHNM QFMRKVAMYG 300
  301 GKQLYELDPS LNCYRVTKWS YQPDADQEDP GVWNLDGEIL EQPKDEPLHF KLHPQLISFF 360
  361 GRDAAMVKPT KRSFIKKRKS SIVYQ

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 36.0
Match: 2bonA
Description: No description for 2bonA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle