YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: CE18023
Organism: Caenorhabditis elegans
Length: 182 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE18023.

Description E-value Query
Range
Subject
Range
gi|76620175 - gi|76620175|ref|XP_607200.2| PREDICTED: similar to MGC10646 protein [Bos taurus]
163.0 [0..1] [182..83]
gi|109074369 - gi|109074369|ref|XP_001090920.1| PREDICTED: similar to N-acetyltransferase, homolog of S. cerevisiae...
162.0 [0..1] [182..1]
gi|114594037 - gi|114594037|ref|XP_526574.2| PREDICTED: glycerol kinase 2 [Pan troglodytes]
162.0 [0..1] [182..690]
gi|113416143, gi... - gi|51464153|ref|XP_496704.1| PREDICTED: hypothetical protein MGC10646 [Homo sapiens], gi|113416143|r...
161.0 [0..1] [182..114]
gi|74222805 - gi|74222805|dbj|BAE42263.1| unnamed protein product [Mus musculus]
157.0 [0..1] [180..1]
NAA11_RAT - N-alpha-acetyltransferase 11 OS=Rattus norvegicus GN=Naa11 PE=2 SV=1
156.0 [0..1] [182..1]

Back

Predicted Domain #1
Region A:
Residues: [1-182]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNIRCARVDD LMSMQNANLM CLPENYQMKY YFYHALSWPQ LSYIAEDHKG NVVGYVLAKM  60
   61 EEDPGEEPHG HITSLAVKRS YRRLGLANKM MDQTARAMVE TYNAKYVSLH VRVSNRAALN 120
  121 LYKNTLKFEI VDTEPKYYAD GEDAYAMRRD LAKWAEERNI EPADREAYTT AKTTDDKKKN 180
  181 RS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 22.09691
Match: 1yr0A
Description: Crystal structure of phosphinothricin acetyltransferase from agrobacterium tumefaciens
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
N-acetyltransferase activity 6.09290029352595 bayes_pls_golite062009
N-acyltransferase activity 6.08913516066746 bayes_pls_golite062009
acetyltransferase activity 5.86411968036951 bayes_pls_golite062009
histone acetyltransferase activity 5.85159161781386 bayes_pls_golite062009
lysine N-acetyltransferase activity 5.85159161781386 bayes_pls_golite062009
acyltransferase activity 4.72881921515185 bayes_pls_golite062009
transferase activity, transferring acyl groups 4.70793039001114 bayes_pls_golite062009
transferase activity, transferring acyl groups other than amino-acyl groups 4.69837915971204 bayes_pls_golite062009
transferase activity 3.5778020729894 bayes_pls_golite062009
myristoyltransferase activity 3.50779447340192 bayes_pls_golite062009
glycylpeptide N-tetradecanoyltransferase activity 3.50779447340192 bayes_pls_golite062009
3.29707445389818 bayes_pls_golite062009
catalytic activity 1.97933499002461 bayes_pls_golite062009
binding 1.07749536895426 bayes_pls_golite062009
nucleic acid binding 0.522132859536345 bayes_pls_golite062009
protein binding 0.098756769132141 bayes_pls_golite062009
transcription regulator activity 0.0766125702622449 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle