YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: CE17994
Organism: Caenorhabditis elegans
Length: 301 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE17994.

Description E-value Query
Range
Subject
Range
gi|73586870 - gi|73586870|gb|AAI03292.1| NP protein [Bos taurus]
279.0 [0..1] [301..15]

Back

Predicted Domain #1
Region A:
Residues: [1-301]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MENNNSPTNA AEHNQKIDPR NYDDVLSVAA SIREQVGEDV ARADLGIICG SGLGPIGDTV  60
   61 QDATILPYSK IPGFPTTHVV GHKGNMIFGK LGGKKVVCLQ GRFHPYEHNM DLALCTLPVR 120
  121 VMHQLGIKIM IVSNAAGGIN AVLRHGDLML IKDHIFLPAL AGFSPLVGCN DPRFGARFVS 180
  181 VHDAYDKQLR QLAIDVGRRS DMTLYEGVYV MSGGPQYESP AEVSLFKTVG ADALGMSTCH 240
  241 EVTVARQCGI KVLGFSLITN IANLDADASV EVSHEEVMDI AQQAGERASR FVSDIITEIT 300
  301 L

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 73.154902
Match: 1lv8A
Description: Crystal structure of calf spleen purine nucleoside phosphorylase in a new space group with full trimer in the asymmetric unit
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
purine-nucleoside phosphorylase activity 3.68206997938506 bayes_pls_golite062009
transferase activity, transferring glycosyl groups 3.66765825367784 bayes_pls_golite062009
hydrolase activity, hydrolyzing N-glycosyl compounds 2.28129906270728 bayes_pls_golite062009
catalytic activity 2.18268586151113 bayes_pls_golite062009
transferase activity, transferring pentosyl groups 2.01261001022129 bayes_pls_golite062009
S-methyl-5-thioadenosine phosphorylase activity 1.6959166270803 bayes_pls_golite062009
binding 1.58090357201399 bayes_pls_golite062009
nicotinamide riboside hydrolase activity 1.38986205931368 bayes_pls_golite062009
hydrolase activity, acting on glycosyl bonds 1.38135070025071 bayes_pls_golite062009
protein binding 1.28444435808613 bayes_pls_golite062009
nucleoside binding 1.11256863177576 bayes_pls_golite062009
purine binding 1.00226077276304 bayes_pls_golite062009
nucleobase binding 0.914372836742171 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle