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View Structure Prediction Details

Protein: CE16301
Organism: Caenorhabditis elegans
Length: 460 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE16301.

Description E-value Query
Range
Subject
Range
CE09937 - status:Partially_confirmed UniProt:Q9GYT4 protein_id:AAF99937.1
351.0 [0..1] [460..1]

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Predicted Domain #1
Region A:
Residues: [1-359]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPETELHVIF DQPNEVFFPG QPISGRVVLS TTKEKYKARA VNIKILGLAH TSWTDYESVR  60
   61 RVDADGKVSH HRQSVHYSAN VNYLDYTLLL WACKDGSNEL AAGEYAWSFS YNLPLNVPPS 120
  121 FEGKYGYLRY SVTAEVDRPW RLDKAKKRCI TVSPLIDLNV IPHALTQIND QASENLGCCC 180
  181 FKKGYLELRV NIPKTGFVPG ETVPMNIHIL NHSSVPVTEV KAKIIQQCKF IAYRNGTTFH 240
  241 YGGGYETGMS GQLQETKHDT KTVVKHGQEM TVAPRNEHKF AMELRLPSVT PTINQFSPVI 300
  301 TVEYIVQFHV ETSSTFGSDV DCEMGILIGT VPIRQFLPPA YYPQDPNLPQ ILPTPIGGG

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 73.09691
Match: 1jsyA
Description: Arrestin
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 1.31731162588602 bayes_pls_golite062009
protein binding 1.27021881529494 bayes_pls_golite062009

Predicted Domain #2
Region A:
Residues: [360-460]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VVAPPPGYGF LPMADGSEKG AGDASYPAAS MPMYPIPNVP YPSKDDGTVV IPSAPPLSYE  60
   61 ESMFGQDGTE LNTDENEQPF APKYPVFNNL PVYNPTAPPP E

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 0.981
Match: 1pk8A
Description: Crystal Structure of Rat Synapsin I C Domain Complexed to Ca.ATP
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
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