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View Structure Prediction Details

Protein: mtx-1
Organism: Caenorhabditis elegans
Length: 312 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for mtx-1.

Description E-value Query
Range
Subject
Range
gi|147904930, gi... - gi|49522726|gb|AAH71140.1| LOC407749 protein [Xenopus laevis], gi|46811895|gb|AAT02191.1| metaxin 1 ...
192.0 [0..1] [307..5]

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Predicted Domain #1
Region A:
Residues: [1-312]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MELHIWPSDF GLPTIDVVSL QFLACSKMCA SPVRVIQSTR PWRSPSGELP MVAQTEGEAK  60
   61 PVTDFEKFVD ILKKCGQDVV IDADLTTIEK AQLDAFSCYL HHNLYPAVMH TFWTDELNYN 120
  121 TVTQYWYASH LHFPYNLYYL EKRRKKALRL LAGKNDTEIL KEAFMALNTL STKLGDNKFF 180
  181 CGNKPTSLDA LVFGYLAPLL RVPLPNDRLQ VQLSACPNLV RFVETVSSIY LPLGEDELKR 240
  241 QQANRKMWQS RISKAKADKE AAKTTEEASE SLPEEPPMRD AILFTLGALT LSLVFAIHTG 300
  301 LIQVSVEEEI SE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 32.0
Match: 1aw9A
Description: STRUCTURE OF GLUTATHIONE S-TRANSFERASE III IN APO FORM
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 0.134535611980449 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle