| Protein: | trm-1 |
| Organism: | Caenorhabditis elegans |
| Length: | 526 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for trm-1.
| Description | E-value | Query Range |
Subject Range |
|
|
502.0 | [0..6] | [526..41] |
|
Region A: Residues: [1-450] |
1 11 21 31 41 51
| | | | | |
1 MTENVNSSGD SAIKSEDKEE VTVIQEGQAK VGFHGPVFYN PVQEFNRDLT VTVLRQFSAD 60
61 HQKWAEEQKQ LKTEEEPPKK KNKLAINEDG KIRILDALSA SGLRALRFSK EVPNVGFIMA 120
121 NDFSDNAVAS IQENVKLNGV EDIVEAHFGD AVMTMMEHRG IDKRFHAVDL DPYGTASTFL 180
181 DSAVQCVADR GILMVTCTDM AVLCGNTPEA CYNKYDAVTT RMKCCHEVGL RILLRAIDSA 240
241 ANRYTRYIEP LVSISVDFYV RVFVRVHTGA FQAKQSGTKV GTVLVCSGCH SMEPLVLLKR 300
301 GEGNQQSKYS IPTVRHSISG PGNRCIHCLL PLHQIGPIYL APIHSKPFVT SLLERLKSTP 360
361 EAERLGTHGR LQGVLTMVNE ELDDVLYYEH NQMANVVKVS VPKSQSVRSA ILNAGFKVSG 420
421 SHCNPRAIKT NAPMHLLWDI YRQVAKDTSV
|
| Detection Method: |  |
| Confidence: | 72.221849 |
| Match: | 2dulA |
| Description: | No description for 2dulA was found. |
| Term | Confidence | Notes |
| methyltransferase activity | 4.15445027778357 | bayes_pls_golite062009 |
| N-methyltransferase activity | 4.07806017452628 | bayes_pls_golite062009 |
| transferase activity, transferring one-carbon groups | 4.07153733729662 | bayes_pls_golite062009 |
| protein methyltransferase activity | 3.92746815303714 | bayes_pls_golite062009 |
| S-adenosylmethionine-dependent methyltransferase activity | 3.39429041855776 | bayes_pls_golite062009 |
| RNA methyltransferase activity | 3.07428840534971 | bayes_pls_golite062009 |
| histone methyltransferase activity | 2.99461585647365 | bayes_pls_golite062009 |
| tRNA methyltransferase activity | 2.5931020126592 | bayes_pls_golite062009 |
| tRNA (guanine) methyltransferase activity | 2.44201549586712 | bayes_pls_golite062009 |
| arginine N-methyltransferase activity | 2.41876112831625 | bayes_pls_golite062009 |
| protein-arginine N-methyltransferase activity | 2.41876112831625 | bayes_pls_golite062009 |
| DNA-methyltransferase activity | 2.39581687084457 | bayes_pls_golite062009 |
| rRNA methyltransferase activity | 2.29640050660273 | bayes_pls_golite062009 |
| transferase activity | 2.22303238506686 | bayes_pls_golite062009 |
| histone-arginine N-methyltransferase activity | 2.04296107639729 | bayes_pls_golite062009 |
| tRNA (cytosine)-methyltransferase activity | 1.88889414729709 | bayes_pls_golite062009 |
| tRNA (cytosine-5-)-methyltransferase activity | 1.88889414729709 | bayes_pls_golite062009 |
| protein-arginine omega-N monomethyltransferase activity | 1.66871163498737 | bayes_pls_golite062009 |
| tRNA (guanine-N2-)-methyltransferase activity | 1.5444293148467 | bayes_pls_golite062009 |
| tRNA (adenine-N1-)-methyltransferase activity | 1.29759910099835 | bayes_pls_golite062009 |
| tRNA (adenine)-methyltransferase activity | 1.29759910099835 | bayes_pls_golite062009 |
| catalytic activity | 1.25333584501255 | bayes_pls_golite062009 |
| histone methyltransferase activity (H4-R3 specific) | 1.1103522853299 | bayes_pls_golite062009 |
| transcription regulator activity | 0.914549843668268 | bayes_pls_golite062009 |
| protein-arginine omega-N asymmetric methyltransferase activity | 0.89325812193225 | bayes_pls_golite062009 |
| DNA binding | 0.86027591375666 | bayes_pls_golite062009 |
| site-specific DNA-methyltransferase (adenine-specific) activity | 0.703178429468566 | bayes_pls_golite062009 |
| nucleic acid binding | 0.616949327277483 | bayes_pls_golite062009 |
| rRNA (adenine) methyltransferase activity | 0.533090627724779 | bayes_pls_golite062009 |
| rRNA (adenine-N6,N6-)-dimethyltransferase activity | 0.455449410561251 | bayes_pls_golite062009 |
| RNA binding | 0.417524996559564 | bayes_pls_golite062009 |
| binding | 0.383237930789959 | bayes_pls_golite062009 |
|
Region A: Residues: [451-526] |
1 11 21 31 41 51
| | | | | |
1 DREKRLAKES AGYHILGQPI TNTVNFTLHP GAIEQAKKEN LVRFQCNKGK NWGPRQKAKG 60
61 SVNSTKAGFQ LTEHKE
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
