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View Structure Prediction Details

Protein: CE09514
Organism: Caenorhabditis elegans
Length: 383 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE09514.

Description E-value Query
Range
Subject
Range
gi|71146272, gi|... - gi|71280532|ref|YP_271320.1| oxidoreductase, FAD-dependent [Colwellia psychrerythraea 34H], gi|71146...
206.0 [0..9] [383..21]

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Predicted Domain #1
Region A:
Residues: [1-383]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLYALLLLFG GVSTVSSLRV AVVGEGVIGL STATAILDLA EKRNIPAPEI HIFHHKPFEK  60
   61 ILSRHIAGLF RIDSGSEIDR KYGYDTFEKL ATLWREYGGL SGVQLVSGHI LSDSKTKLDS 120
  121 QRESYGSLVY NYRDLAEPEL FGPTSLFDLP RNTTTRGIHY TAYTSEGLRF CPFLKKELMT 180
  181 KGVRFTQRRI GNLEELGAEF DVVVNSAGLL GGVLAGDDAG NMKPIRGVLI RVDAPWQKHF 240
  241 LYRDFSTITI PVIDHVYMGT VKQEGAFGPN NVTSADIQDI TSRYVALQPS FKRVHMLSSF 300
  301 VGYRPGRKQV RVEKQIRETN GSKKFTVVHN YGHSGNGFTL GYGSAVHAAH IVLDLPLDAY 360
  361 HGLVPEPLPI NATISEWVKY LDD

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 34.522879
Match: 1an9A
Description: D-aminoacid oxidase, N-terminal domain; D-aminoacid oxidase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 1.08897727611544 bayes_pls_golite062009
catalytic activity 1.03127962968326 bayes_pls_golite062009
oxidoreductase activity 0.943208146517927 bayes_pls_golite062009
oxidoreductase activity, acting on the CH-NH2 group of donors 0.397770205910041 bayes_pls_golite062009
protein binding 0.247306689726508 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle