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View Structure Prediction Details

Protein: lys-7
Organism: Caenorhabditis elegans
Length: 283 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for lys-7.

Description E-value Query
Range
Subject
Range
lys-8 - status:Confirmed UniProt:Q09975 protein_id:AAB93455.1
248.0 [0..1] [280..1]
gi|187037404, gi... - gi|39596917|emb|CAE59144.1| Hypothetical protein CBG02448 [Caenorhabditis briggsae], gi|187037404|em...
gi|157752066 - gi|157752066|ref|XP_001679745.1| Hypothetical protein CBG02448 [Caenorhabditis briggsae AF16]
243.0 [0..1] [277..1]
gi|15075218 - gi|15075218|emb|CAC46775.1| Putative hydrolase glycosidase [Sinorhizobium meliloti 1021]
gi|15965949 - gi|15965949|ref|NP_386302.1| putative hydrolase glycosidase protein [Sinorhizobium meliloti 1021]
208.0 [0..1] [259..1]

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Predicted Domain #1
Region A:
Residues: [1-283]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAHKSIVIFS VLAVLCHSAS VKVPPIVDSS LPVKFSEVIA EPAPNVPSNL ASYAYALDIY  60
   61 VQTTLSQLQC IKQAGYCAVF VRAYNPAGQG SFDTSSCVTI QNAYKAGLGI EIYMTPQPVS 120
  121 NKQGYQQLDE IIQGLTARAI TVRAIWIQVT SPTNWPNNAN SNINFINSIV SRARQSGLTV 180
  181 GIYTSYYDWN QITTGWSNIG NDVLLWYWNV YSGGVTGETP ANFNDFRKFG CWTAPSVKQF 240
  241 AQDETVCGIT VNRDVYLAGN VLKAVEEDGK IYAGGFVQGS LKI

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 45.09691
Match: 1jfxA
Description: Streptomyces lysozyme
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
hydrolase activity, acting on glycosyl bonds 0.279839460874635 bayes_pls_golite062009
hydrolase activity 0.220893158135492 bayes_pls_golite062009
catalytic activity 0.191302991685802 bayes_pls_golite062009
hydrolase activity, hydrolyzing O-glycosyl compounds 0.0804992363272641 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle