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View Structure Prediction Details

Protein: bra-1
Organism: Caenorhabditis elegans
Length: 183 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for bra-1.

Description E-value Query
Range
Subject
Range
DEAF1_RAT - Deformed epidermal autoregulatory factor 1 homolog OS=Rattus norvegicus GN=Deaf1 PE=1 SV=1
165.0 [0..9] [181..390]
DEAF1_MOUSE - Deformed epidermal autoregulatory factor 1 homolog OS=Mus musculus GN=Deaf1 PE=1 SV=1
164.0 [0..9] [181..391]
MTG8R_XENLA - Protein CBFA2T2 OS=Xenopus laevis GN=cbfa2t2 PE=2 SV=2
162.0 [0..10] [182..384]
bra-2 - status:Confirmed UniProt:O01918 protein_id:AAC71131.1
161.0 [0..16] [183..42]
gi|407727 - gi|407727|dbj|BAA03089.1| AML1-MTG8 fusion protein [Homo sapiens]
158.0 [0..2] [180..547]
gi|73982132 - gi|73982132|ref|XP_540529.2| PREDICTED: similar to deformed epidermal autoregulatory factor 1 [Canis...
157.0 [0..9] [181..390]

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Predicted Domain #1
Region A:
Residues: [1-119]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSEEAEAGPS PKVNGENGNG TNTFDDLYVD DKMRRMIVDL QRQWLTDYHD SREKSLVALT  60
   61 EKLHQEFMED QERVRRDLLV QFKIELDQTK EELEKKHAEN LKEEIEKLSE KHQRELAVA

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [120-183]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KKKQWCWQCN SEAIYHCCWN TAYCSVECQQ GHWQIHRKFC RRKKSNGGAP GPVQPIAEPT  60
   61 QSQQ

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 9.09691
Match: 2oddA
Description: No description for 2oddA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle