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View Structure Prediction Details

Protein: bra-1
Organism: Caenorhabditis elegans
Length: 183 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for bra-1.

Description E-value Query
Range
Subject
Range
DEAF1_RAT - Deformed epidermal autoregulatory factor 1 homolog OS=Rattus norvegicus GN=Deaf1 PE=1 SV=1
165.0 [0..9] [181..390]
DEAF1_MOUSE - Deformed epidermal autoregulatory factor 1 homolog OS=Mus musculus GN=Deaf1 PE=1 SV=1
164.0 [0..9] [181..391]
MTG8R_XENLA - Protein CBFA2T2 OS=Xenopus laevis GN=cbfa2t2 PE=2 SV=2
162.0 [0..10] [182..384]
bra-2 - status:Confirmed UniProt:O01918 protein_id:AAC71131.1
161.0 [0..16] [183..42]
gi|407727 - gi|407727|dbj|BAA03089.1| AML1-MTG8 fusion protein [Homo sapiens]
158.0 [0..2] [180..547]
gi|73982132 - gi|73982132|ref|XP_540529.2| PREDICTED: similar to deformed epidermal autoregulatory factor 1 [Canis...
157.0 [0..9] [181..390]

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Predicted Domain #1
Region A:
Residues: [1-119]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSEEAEAGPS PKVNGENGNG TNTFDDLYVD DKMRRMIVDL QRQWLTDYHD SREKSLVALT  60
   61 EKLHQEFMED QERVRRDLLV QFKIELDQTK EELEKKHAEN LKEEIEKLSE KHQRELAVA

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [120-183]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KKKQWCWQCN SEAIYHCCWN TAYCSVECQQ GHWQIHRKFC RRKKSNGGAP GPVQPIAEPT  60
   61 QSQQ

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 9.09691
Match: 2oddA
Description: No description for 2oddA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle