YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: CE05595
Organism: Caenorhabditis elegans
Length: 451 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE05595.

Description E-value Query
Range
Subject
Range
gi|182891524, gi... - gi|28279582|gb|AAH45410.1| Pold2 protein [Danio rerio], gi|182891524|gb|AAI64684.1| Pold2 protein [D...
433.0 [0..2] [448..21]

Back

Predicted Domain #1
Region A:
Residues: [1-183]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 METAWSNILN YKNVSDRYIL TEKDKKGAFT RQYFEVYEAR LKELKPRILE NAEREIGKGK  60
   61 FTHSQLSDAK QDEEIFVVGV IVKRIAARPS ILKSLLNEDK VAYDDYEEDA EEDEVKRYAG 120
  121 SIEDRIELES DKQTVRLEGN ISMDECATGC CVGVLGKLGK EGVFHVNRLV WPSVKVPKKV 180
  181 AVD

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [184-451]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GTIAFVSGLD LTGDLEDDRL TISGLEFMAD WMNVQVGNEN QCPPIDRLVV IGPLVETKSN  60
   61 GCDVQSVVRT LTLSRAEKHS STASLITVDK IINSIAEKPL VNTVDVTPGV GDPCSSMWPL 120
  121 PPIHRVCLPR CGMSDKKVNL VTNPYEFEVN GLRVMTMSGE NVSELLRTSL KWTGADAIEN 180
  181 IIKWQHVAPN CPDTLDAFPV AERDPLIMDI TPHVIICGNQ PHAEFRHIPI DGSNCLVVCL 240
  241 PKFSKTRVAC FLNLSDLSLK WQNFDHQF

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.25
Match: 2yvtA
Description: No description for 2yvtA was found.

Predicted functions:

Term Confidence Notes
hydrolase activity 2.89784024382425 bayes_pls_golite062009
hydrolase activity, acting on ester bonds 2.54644459918406 bayes_pls_golite062009
transferase activity, transferring phosphorus-containing groups 1.75775204356118 bayes_pls_golite062009
transferase activity 1.71554219929081 bayes_pls_golite062009
binding 1.30309680165893 bayes_pls_golite062009
catalytic activity 1.30037658165549 bayes_pls_golite062009
protein serine/threonine phosphatase activity 1.17916462117542 bayes_pls_golite062009
phosphoric ester hydrolase activity 0.950264524479969 bayes_pls_golite062009
phosphatase activity 0.829761417192212 bayes_pls_golite062009
phosphoprotein phosphatase activity 0.768201004870964 bayes_pls_golite062009
structural molecule activity 0.211411396269789 bayes_pls_golite062009
protein binding 0.20380491058914 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle