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View Structure Prediction Details

Protein: pho-6
Organism: Caenorhabditis elegans
Length: 344 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for pho-6.

Description E-value Query
Range
Subject
Range
gi|73990573 - gi|73990573|ref|XP_542782.2| PREDICTED: similar to acid phosphatase, prostate isoform 1 [Canis famil...
335.0 [0..1] [342..244]

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Predicted Domain #1
Region A:
Residues: [1-344]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQAIWRHGDR APGDLPYPKD KYNETFWPRG WDQLTNKGIW QAVELGIWLR QRYGATVLPI  60
   61 FDKDKVFILS SDSERAIETA QGVSAGLFPP VDDRVWESSY LRYWQPTPIQ TAYGTIDALL 120
  121 RPTKVKCPNY DLANEQEEAP IATQINNEYG QMFNWLQNIT GMESIDFWNI NDLYDIQREL 180
  181 DHNMPQPQWL NQVFNGTTIM DHIRELKRIT RNQEFNSPTK AKFRGGMLVN QFLQNMEDLK 240
  241 ANKTTKNAMM YSSHDGTLSA LLYALNVSND QLVPYTATVL FELYDDNTVQ LFYKNTTSTA 300
  301 YPMTIPGCQQ ICPYSQFLQL LENVRVRSLD ALYSVSKDLK IITK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 87.39794
Match: 1nd5A
Description: Prostatic acid phosphatase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
phosphatase activity 5.40518425721991 bayes_pls_golite062009
phosphoric ester hydrolase activity 5.19464980606549 bayes_pls_golite062009
hydrolase activity, acting on ester bonds 4.32643444525143 bayes_pls_golite062009
catalytic activity 1.37714494241232 bayes_pls_golite062009
phosphoprotein phosphatase activity 1.35665111303981 bayes_pls_golite062009
phosphotransferase activity, alcohol group as acceptor 1.01761355562415 bayes_pls_golite062009
binding 0.926914834433224 bayes_pls_golite062009
kinase activity 0.891791120150528 bayes_pls_golite062009
transferase activity, transferring phosphorus-containing groups 0.57794482374484 bayes_pls_golite062009
hydrolase activity 0.430434913051609 bayes_pls_golite062009
protein binding 0.259674156092283 bayes_pls_golite062009
acid phosphatase activity 0.165928903648173 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle