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View Structure Prediction Details

Protein: CE04098
Organism: Caenorhabditis elegans
Length: 516 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE04098.

Description E-value Query
Range
Subject
Range
gi|91078858 - gi|91078858|ref|XP_972061.1| PREDICTED: similar to thymus-specific serine protease [Tribolium castan...
389.0 [0..2] [515..1]

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Predicted Domain #1
Region A:
Residues: [1-348]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKSLNLLLVL GALFAHSESA RHPHLPPYLL GRPTEHGFVR HGDRFFTNFD TPAPNLNRST  60
   61 ISQKVDNFDA NNNAMYNQRY WYNPTFTQNK NIVFLMIQGE APATDTWISN PNYQYLQWAK 120
  121 EFGADVFQLE HRCFGQSRPY PDTSMPGIKV CTMTQALADI HNFIQQMNRR FNFQNPKWIT 180
  181 FGGSYPGTLS ALFRQQYPAD TVGAVASSAP LDWTLDFFEY AMVVEDVLKK TSVDCWRNVN 240
  241 QAFLNMQQLS LTKAGIQQLN TYFNLVPAFV DGQYTQHDID NFFANVYSFF QGVVQYTYDG 300
  301 RNNATLNGLN AQQLCNKMND ATVPDVITRV NNTINWINQM NGDPVGPF

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 36.69897
Match: 1azwA
Description: Proline iminopeptidase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
hydrolase activity 3.13500795029724 bayes_pls_golite062009
catalytic activity 1.39629727416851 bayes_pls_golite062009
hydrolase activity, acting on ester bonds 0.560001331598537 bayes_pls_golite062009
peptidase activity 0.49210021845334 bayes_pls_golite062009
peptidase activity, acting on L-amino acid peptides 0.204622919291197 bayes_pls_golite062009
structural molecule activity 0.151914509834157 bayes_pls_golite062009
binding 0.112743564301567 bayes_pls_golite062009

Predicted Domain #2
Region A:
Residues: [349-516]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QNSYSDMMTV LANASYDDNS AVPGDIAANR GWMWLCCNEL GALQTTDQGR NIFQQTVPLG  60
   61 YFIDMCTDMF GADIGIKYVR DNNKQTLYKY KGADNYQATN VVLPNGAFDP WHVLGTYNND 120
  121 TANHMTPLLI QGAAHCSDMY PTYPGEPTDL AKNRAIIHNE LKYFLGIS

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle