| Protein: | dnc-4 |
| Organism: | Caenorhabditis elegans |
| Length: | 413 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for dnc-4.
| Description | E-value | Query Range |
Subject Range |
|
|
554.0 | [0..1] | [412..1] |
|
Region A: Residues: [1-275] |
1 11 21 31 41 51
| | | | | |
1 MSELLQYSRI KYECTCGKFR TLPDLVFCRY CFKIKCDDCS LGEVDNIFCP RCLEPSSVPE 60
61 ARLKKHKCAS CNDCPKCANV LSARTENDNV YLVCQYCRWS SREANQEDQE NTKSWPTKEN 120
121 PLVNQLGEVT AYMKRLELIE NAPKDLKKGK SGKAWTAFHL KDKFGFQQMV DKRKKALAPE 180
181 MNPVDAHAPT EAPTLEDEIK ERTDDLRTLD QIIMQPLINI SEPLLPVQVP LAGRVQVRCD 240
241 ECERTLIKRD FGVTTFKFKI SSFARQFVPD IRMSR
|
| Detection Method: |  |
| Confidence: | 1.07 |
| Match: | 1sp3A |
| Description: | Crystal structure of octaheme cytochrome c from Shewanella oneidensis |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 1.4597113579151 | bayes_pls_golite062009 |
|
Region A: Residues: [276-413] |
1 11 21 31 41 51
| | | | | |
1 PVDDLKVGET SHVFLSITNL SSSAMDLTIA PQSGNGFIQC SSDPIQLLLP SSRASDTAAP 60
61 GVHADQSDVI VFRQHNRVGL RLDVIPTEMD LSSPCLNLLI TYCQDGSFRL SSASDKILKP 120
121 EETCPDPILS ANLKVDLR
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
