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View Structure Prediction Details

Protein: fem-2
Organism: Caenorhabditis elegans
Length: 449 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for fem-2.

Description E-value Query
Range
Subject
Range
gi|2997788, gi|1... - gi|2997788|gb|AAC08602.1| putative PP2C protein phosphatase FEM-2 [Caenorhabditis briggsae], gi|1870...
344.0 [0..2] [435..54]

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Predicted Domain #1
Region A:
Residues: [1-155]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEKVNEERDA VFEDHIGDRR RSVRSLLEEA FADEMEKTSY DVEVADTPQP HIPIRFRHPP  60
   61 IAGPVHDVFG DAIHDIFQKM MKRGQAVDFC HWVSHLIATE IDEKFSEVAF RDVQYNPDIY 120
  121 VTDSTTEAKK LFNDKIWPAI DKILQQNAET CPILS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [156-449]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EKWSGIHVSG DQLKGQRHKQ EDRFLAYPNG QYMDRGEDPI SVLAVFDGHG GHECSQYAAG  60
   61 HLWETWLEVR KSRDPSDSLE DQLRKSLELL DERMTVRSVK ECWKGGSTAV CCAIDMDQKL 120
  121 MALAWLGDSP GYVMSNIEFR QLTRGHSPSD EREARRVEEA GGQLFVIGGE LRVNGVLNLT 180
  181 RALGDVPGRP MISNEPETCQ VPIESSDYLV LLACDGISDV FNERDLYQLV EAFANDYPVE 240
  241 DYAELSRFIC TKAIEAGSAD NVSVVIGFLR PPQDVWKLMK HESDDEDSDV TDEE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 67.69897
Match: 1a6qA
Description: CRYSTAL STRUCTURE OF THE PROTEIN SERINE/THREONINE PHOSPHATASE 2C AT 2 A RESOLUTION
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
phosphoprotein phosphatase activity 7.29765002420868 bayes_pls_golite062009
phosphatase activity 6.46633224572308 bayes_pls_golite062009
phosphoric ester hydrolase activity 6.25564034681743 bayes_pls_golite062009
protein serine/threonine phosphatase activity 5.66354576593165 bayes_pls_golite062009
hydrolase activity, acting on ester bonds 5.62997267604309 bayes_pls_golite062009
hydrolase activity 4.10826723952347 bayes_pls_golite062009
binding 1.74689317666387 bayes_pls_golite062009
catalytic activity 1.53401212718168 bayes_pls_golite062009
protein binding 0.425331902048676 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle