| Protein: | CE01112 |
| Organism: | Caenorhabditis elegans |
| Length: | 522 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE01112.
| Description | E-value | Query Range |
Subject Range |
|
|
338.0 | [0..1] | [453..1] |
|
Region A: Residues: [1-107] |
1 11 21 31 41 51
| | | | | |
1 MNPSISTAGA VVDDFQMSCR FSNFGDHAPE SFDSLSCGAC FYFIFMLVEH YKDRYVASLC 60
61 EDTFGVLVCP VDVSDKICNC YNREYVYNIP EFALNSSRIK PLNHLRL
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [108-199] |
1 11 21 31 41 51
| | | | | |
1 DPPLPFQFDL IVKDCCSAAR YCCRNTLVKY HHRVDDSPCP PTWDGWNCFD SATPGVVFKQ 60
61 CPNYIYGGSN IKTDYDRLSQ KVCRSNGWAT PE
|
| Detection Method: | |
| Confidence: | 16.0 |
| Match: | 2jodA |
| Description: | No description for 2jodA was found. |
| Term | Confidence | Notes |
| G-protein coupled receptor activity | 7.11838006478957 | bayes_pls_golite062009 |
| transmembrane receptor activity | 5.41031049482732 | bayes_pls_golite062009 |
| receptor activity | 5.12318570081263 | bayes_pls_golite062009 |
| signal transducer activity | 4.16951678107564 | bayes_pls_golite062009 |
| molecular transducer activity | 4.16951678107564 | bayes_pls_golite062009 |
| pituitary adenylate cyclase-activating polypeptide receptor activity | 2.36627671354861 | bayes_pls_golite062009 |
| binding | 1.90935265027969 | bayes_pls_golite062009 |
| peptide binding | 1.37672683415634 | bayes_pls_golite062009 |
| growth hormone-releasing hormone receptor activity | 0.621179725102141 | bayes_pls_golite062009 |
|
Region A: Residues: [200-522] |
1 11 21 31 41 51
| | | | | |
1 VNAAAREHTD YTGCMSNGDV EARILAGLLT YSASVIFLIP AVFLLTLLRP IRCQPMFILH 60
61 RHLLISCLLY GAFYLITVSL FVVNDAPLSS QVFQNHLFCR LLFSIQLRYL RLTNFTWMLA 120
121 EAVYLWRLLH TAQHSEGETL RSYKVICWGV PGVITVVYIF VRSLNDDVGM CWIENSTVAW 180
181 IEWMIITPSL LAMGVNLLLL GLIVYILVKK LRCDPHLERI QYRKAVRGAL MLIPVFGVQQ 240
241 LLTIYRFSNT YYQVTDQSLN GLQGMFVSFI VCYTNRSVVE CVLKFWSSHQ EKRALGAECR 300
301 QRMSIQESGK LILRPPQTEH VVL
|
| Detection Method: | |
| Confidence: | 37.522879 |
| Match: | 1f88A |
| Description: | Rhodopsin |
Matching Structure (courtesy of the PDB): |
|
