| Protein: | CE01075 |
| Organism: | Caenorhabditis elegans |
| Length: | 307 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE01075.
| Description | E-value | Query Range |
Subject Range |
|
|
193.0 | [0..1] | [306..69] |
|
Region A: Residues: [1-223] |
1 11 21 31 41 51
| | | | | |
1 MVAQNPTSIS SGGRKQPQKQ DKVQKKQLKK IYVVKIKRIP FGFFEKELLG YFRQFGNVLR 60
61 IRVARNRRTG NHKGWAYVGF DNKAVAEIAA ESMNGYLMFE QRLGCTVMKP ELIPKAMRHG 120
121 PLLVMRPSYL GIAKKDTIAR NNTTGKNDVI NAKKRVQNLN KTLKKLQNMG INYDFSVSGT 180
181 PRTPLKKVID NEVQFISDVT PKSTTPKIVK AATPKAATPK AVT
|
| Detection Method: |  |
| Confidence: | 27.69897 |
| Match: | 1po6A |
| Description: | Crystal Structure of UP1 Complexed With d(TAGG(6MI)TTAGGG): A Human Telomeric Repeat Containing 6-methyl-8-(2-deoxy-beta-ribofuranosyl)isoxanthopteridine (6MI) |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.950788308762215 | bayes_pls_golite062009 |
| nucleic acid binding | 0.29562225149076 | bayes_pls_golite062009 |
|
Region A: Residues: [224-307] |
1 11 21 31 41 51
| | | | | |
1 PKQATPKVST PVTKKVVIKT PKTEKPEPKQ FTPKTRAGKK AAAAATPQAK STLSNTILKS 60
61 VAASARPAAV EKKTLRSRGK KKSL
|
| Detection Method: | |
| Confidence: | 1.62 |
| Match: | 2j63A |
| Description: | No description for 2j63A was found. |
