| Protein: | CE00548 |
| Organism: | Caenorhabditis elegans |
| Length: | 213 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE00548.
| Description | E-value | Query Range |
Subject Range |
|
|
256.0 | [0..4] | [213..136] |
|
|
250.0 | [0..4] | [213..37] |
|
|
247.0 | [0..4] | [213..5] |
|
|
246.0 | [0..4] | [213..5] |
|
|
243.0 | [0..4] | [213..5] |
|
|
242.0 | [0..4] | [213..5] |
|
|
242.0 | [0..4] | [213..5] |
|
Region A: Residues: [1-79] |
1 11 21 31 41 51
| | | | | |
1 MVADVKSPAG LAAFNTTLAE QAFATGFVLS GEDAQLFAAL GSAPNASTYP NVARWYANVA 60
61 SYTDAERKTW ASAGGSAPA
|
| Detection Method: |  |
| Confidence: | 10.522879 |
| Match: | 1jlvA |
| Description: | Class delta GST |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 1.25677962636026 | bayes_pls_golite062009 |
| transferase activity | 1.05573069897577 | bayes_pls_golite062009 |
| catalytic activity | 0.963623964325467 | bayes_pls_golite062009 |
| protein binding | 0.509172505892898 | bayes_pls_golite062009 |
| nucleic acid binding | 0.46030380837916 | bayes_pls_golite062009 |
| transferase activity, transferring alkyl or aryl (other than methyl) groups | 0.44372379417457 | bayes_pls_golite062009 |
| transcription regulator activity | 0.385619646192102 | bayes_pls_golite062009 |
| glutathione transferase activity | 0.20688408808374 | bayes_pls_golite062009 |
| DNA binding | 0.175092771820973 | bayes_pls_golite062009 |
|
Region A: Residues: [80-213] |
1 11 21 31 41 51
| | | | | |
1 AAAADGDDFD LFGSDDEEED AEKAKIVEER LAAYAEKKAK KAGPIAKSSV ILDVKPWDDE 60
61 TDLGEMEKLV RSIEMDGLVW GGAKLIPIGY GIKKLQIITV IEDLKVSVDD LIEKITGDFE 120
121 DHVQSVDIVA FNKI
|
| Detection Method: | |
| Confidence: | 39.045757 |
| Match: | 1b64A |
| Description: | SOLUTION STRUCTURE OF THE GUANINE NUCLEOTIDE EXCHANGE FACTOR DOMAIN FROM HUMAN ELONGATION FACTOR-ONE BETA, NMR, 20 STRUCTURES |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| translation elongation factor activity | 12.3173391557088 | bayes_pls_golite062009 |
| translation factor activity, nucleic acid binding | 7.81664120156021 | bayes_pls_golite062009 |
| translation regulator activity | 7.77673515271111 | bayes_pls_golite062009 |
| actin binding | 3.32293986705361 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 2.89895269798148 | bayes_pls_golite062009 |
| binding | 2.63855036019658 | bayes_pls_golite062009 |
| nucleic acid binding | 2.61354904861592 | bayes_pls_golite062009 |
| protein binding | 0.590516949627746 | bayes_pls_golite062009 |
