Protein: | moc3 |
Organism: | Schizosaccharomyces pombe |
Length: | 497 amino acids |
Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for moc3.
Description | E-value | Query Range |
Subject Range |
|
167.0 | [0..21] | [472..3] |
|
155.0 | [0..134] | [469..255] |
|
139.0 | [0..11] | [418..412] |
|
139.0 | [0..4] | [355..36] |
|
137.0 | [0..16] | [479..1] |
|
136.0 | [0..2] | [355..36] |
Region A: Residues: [1-97] |
1 11 21 31 41 51 | | | | | | 1 MKRNRTGSIN SNPLYIPNPN VEPTPKPTKR RTKTGCLTCR RRRIKCDETK PFCLNCTKTN 60 61 RECEGYPNSA AQMQAMGSVS PPELSVHSAQ QPLIPTS |
Detection Method: | |
Confidence: | 10.09691 |
Match: | 1qp9A |
Description: | Hap1 (Cyp1); HAP1 |
Matching Structure (courtesy of the PDB): |
Region A: Residues: [98-200] |
1 11 21 31 41 51 | | | | | | 1 IASSSAQTGD TFSGSSQSNF NTNDLNQMTS SSNLSTVTPI KQDHQKPMNL QGFPSAYQQH 60 61 QYLQSNHNVP TNNSSSATSS TKPSVQSVGQ ASYPFLSSVS NFP |
Detection Method: | |
Confidence: | 2.36 |
Match: | 1pyiA |
Description: | PPR1 |
Matching Structure (courtesy of the PDB): |
Term | Confidence | Notes |
transcription regulator activity | 4.34861813464065 | bayes_pls_golite062009 |
DNA binding | 4.03985756894684 | bayes_pls_golite062009 |
nucleic acid binding | 3.97978190843512 | bayes_pls_golite062009 |
transcription factor activity | 2.87348461329489 | bayes_pls_golite062009 |
binding | 2.82809978070212 | bayes_pls_golite062009 |
RNA polymerase II transcription factor activity | 1.80191339934741 | bayes_pls_golite062009 |
sequence-specific DNA binding | 1.67344049333457 | bayes_pls_golite062009 |
specific RNA polymerase II transcription factor activity | 1.50774349911815 | bayes_pls_golite062009 |
transcription activator activity | 0.822069987038721 | bayes_pls_golite062009 |
Region A: Residues: [201-314] |
1 11 21 31 41 51 | | | | | | 1 SNFNSELFPF YFHDVVPSIC AFEFDNNIAL HFWSVTVPQF AQSMPCIANS LMAFASIKKL 60 61 DVFGAYSHLT RALRCPMPGP NSFEYLLVSA FLTLTQLNLP AYDLNFCNNF IRKL |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [315-497] |
1 11 21 31 41 51 | | | | | | 1 SWSSSTKSNY VSLLIAMVVR ELVFAILPRG CIWGFNGKPL SEVSVSRSHA PVSDSLFTIG 60 61 LDILSQPTLS DDLHRERMVA WRDEYHVHLY SASRSPLTKV IDCVGHAVTK NNNDVLSGLQ 120 121 QLMQEECTDI AVLRTSYLCV LSLQNVFASN SKEFKLRAQI ESHFGRLMLE HFMDCNVLNR 180 181 PVL |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
View | Download | 0.890 | 0.020 | ascospore formation | a.29.5 | alpha-ketoacid dehydrogenase kinase, N-terminal domain |