YRC Public Data Repository - Protein Structure Prediction

Protein:	SPAC1687.21
Organism:	Schizosaccharomyces pombe
Length:	209 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPAC1687.21.

Description	E-value	Query Range	Subject Range
gi\|134299758, gi... - gi\|88944800\|ref\|ZP_01148024.1\| Phosphoglycerate mutase/fructose-2,6-bisphosphatase [Desulfotomaculum...	179.0	[0..2]	[199..5]
GPMA_TREDE - 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase OS=Treponema denticola GN=gpmA PE=3 SV=1 GPMA_TREDE - 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase OS=Treponema denticola (strain ATCC 35405 ...	178.0	[0..1]	[197..1]
gi\|47212179 - gi\|47212179\|emb\|CAF95127.1\| unnamed protein product [Tetraodon nigroviridis]	177.0	[0..2]	[206..6]
GPMA_CLOPH - 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase OS=Clostridium phytofermentans (strain ATC...	176.0	[0..1]	[204..1]
gi\|71674245, gi\|... - gi\|71674245\|ref\|ZP_00671992.1\| Phosphoglycerate/bisphosphoglycerate mutase [Trichodesmium erythraeum...	176.0	[0..2]	[209..239]
gi\|11761356 - gi\|11761356\|dbj\|BAB19263.1\| phosphoglycerate mutase [Thermosynechococcus elongatus BP-1]	175.0	[0..1]	[209..196]
gi\|68396928 - gi\|68396928\|ref\|XP_707183.1\| PREDICTED: similar to Phosphoglycerate mutase 2 (muscle) isoform 2 [Dan...	175.0	[0..2]	[206..6]
gi\|50603688, gi\|... - gi\|50603688\|gb\|AAH77484.1\| MGC82549 protein [Xenopus laevis], gi\|148233078\|ref\|NP_001086809.1\| MGC82...	175.0	[0..2]	[206..5]

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Predicted Domain #1

Region A:
Residues: [1-209]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKVFLIRHGQ TDQNKRGILQ GSVDTNLNET GRLQAKLLAQ RLLPLDIDQI FCSSMKRCRE  60
   61 TIAPYLELKP EVPIVYTDLI RERVYGDLEG MNVVEAKKLL NANHPDHYGE GLSHLTSRLL 120
  121 KFWDEYVVPL QGKKKCVIVL CHGGVINVLR THFMEEKGFT FDKSKLESKI ITFNTSITEI 180
  181 EVTEHGTGHI HTFGDASHLE SEETGKLIA

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	44.0
Match:	1xq9A
Description:	Structure of Phosphoglycerate Mutase from Plasmodium falciparum at 2.6 Resolution
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
catalytic activity	1.37714494241232	bayes_pls_golite062009
binding	0.911287540615709	bayes_pls_golite062009
phosphatase activity	0.265410208825198	bayes_pls_golite062009
hydrolase activity, acting on ester bonds	0.231318310883925	bayes_pls_golite062009
phosphoric ester hydrolase activity	0.211236676964713	bayes_pls_golite062009
phosphofructokinase activity	0.208291819354252	bayes_pls_golite062009
intramolecular transferase activity	0.17180601190736	bayes_pls_golite062009
protein binding	0.00552499281253183	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: