YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: pro1
Organism: Schizosaccharomyces pombe
Length: 451 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for pro1.

Description E-value Query
Range
Subject
Range
gi|45523555, gi|... - gi|67925207|ref|ZP_00518574.1| Aldehyde dehydrogenase (NAD+) [Crocosphaera watsonii WH 8501], gi|678...
460.0 [0..2] [418..54]
gi|20372798 - gi|20372798|emb|CAD30313.1| aldehyde dehydrogenase [Geobacillus stearothermophilus]
459.0 [0..2] [417..58]
gi|114659188 - gi|114659188|ref|XP_510621.2| PREDICTED: aldehyde dehydrogenase 1A3 isoform 5 [Pan troglodytes]
455.0 [0..2] [424..42]
gi|52785994, gi|... - gi|52785994|ref|YP_091823.1| DhaS [Bacillus licheniformis ATCC 14580], gi|52348496|gb|AAU41130.1| Dh...
455.0 [0..2] [421..61]
gi|109082542 - gi|109082542|ref|XP_001083856.1| PREDICTED: aldehyde dehydrogenase 1A3 [Macaca mulatta]
455.0 [0..2] [424..70]
AL1A3_RAT - Aldehyde dehydrogenase family 1 member A3 OS=Rattus norvegicus GN=Aldh1a3 PE=2 SV=1
453.0 [0..2] [424..70]
gi|73971844 - gi|73971844|ref|XP_538742.2| PREDICTED: similar to aldehyde dehydrogenase 1B1 precursor [Canis famil...
453.0 [0..2] [424..78]
gi|16565463 - gi|16565463|gb|AAL26232.1|AF315691_1 aldehyde dehydrogenase 1A2 [Danio rerio]
453.0 [0..2] [420..76]

Back

Predicted Domain #1
Region A:
Residues: [1-451]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLEENVKEA KNAFNILQTL SVEDRDDALD KIVEELRIKK SEVLAANAED MKAAKLLAES  60
   61 GKLSSSMVKR LDLSSSDKYD SMVQGVLDVK SLPDPLGRVT YARSLDDGLD LYKVSCPVGL 120
  121 LLVIFEARPE VIINITSLAI KSGNAVVLKG GTESAKSFAA LSNVVRSALG KSKVPQAAVQ 180
  181 LVQSREEVSQ LLKLDEYIDL VIPRGSTNLV RHIKDNTKIP VLGHAAGLCS MYVHEDADME 240
  241 LASKLVLDGK TDYPAACNAI ETLLINEAVL SSHLPKIAET LTEAKVTLKC DPASLKVLKD 300
  301 MPKVSALVEP SVDQDYNTEF SDLILAIKTV PSLQSAMQHI NTHGSKHTDC IITSSEAAAN 360
  361 RFMAGIDASG VYWNASTRFA DGFRYGYGTE VGISTNKIHA RGPMGLDGLT IYKYQLRGNG 420
  421 QVASSYGVGP GKRAFKHTPI NIDNISQVSK K

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 79.69897
Match: 1vluA
Description: Crystal structure of Gamma-glutamyl phosphate reductase (yor323c) from Saccharomyces cerevisiae at 2.40 A resolution
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
glutamate-5-semialdehyde dehydrogenase activity 3.27180265380824 bayes_pls_golite062009
catalytic activity 2.80804701752928 bayes_pls_golite062009
1-pyrroline-5-carboxylate dehydrogenase activity 2.65686856100363 bayes_pls_golite062009
oxidoreductase activity 2.31275077585879 bayes_pls_golite062009
oxidoreductase activity, acting on the aldehyde or oxo group of donors 2.24875477727877 bayes_pls_golite062009
oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor 2.22720948878196 bayes_pls_golite062009
oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor 1.6559690223037 bayes_pls_golite062009
oxidoreductase activity, acting on the CH-NH group of donors 1.40606039383065 bayes_pls_golite062009
binding 1.06673666884196 bayes_pls_golite062009
histidinol dehydrogenase activity 0.258030369394064 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle