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View Structure Prediction Details

Protein: SPCC1840.05c
Organism: Schizosaccharomyces pombe
Length: 587 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPCC1840.05c.

Description E-value Query
Range
Subject
Range
gi|73951890 - gi|73951890|ref|XP_536263.2| PREDICTED: similar to phosphoglucomutase 2 [Canis familiaris]
469.0 [0..1] [585..14]
gi|109499698 - gi|109499698|ref|XP_214047.4| PREDICTED: similar to phosphoglucomutase 1 [Rattus norvegicus]
465.0 [0..1] [585..65]
gi|12052930 - gi|12052930|emb|CAB66640.1| hypothetical protein [Homo sapiens]
463.0 [0..2] [585..12]
gi|76636070 - gi|76636070|ref|XP_593375.2| PREDICTED: similar to phosphoglucomutase 2-like 1 [Bos taurus]
462.0 [0..2] [585..22]
gi|21410124 - gi|21410124|gb|AAH30869.1| Pgm1 protein [Mus musculus]
461.0 [0..1] [585..17]

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Predicted Domain #1
Region A:
Residues: [1-587]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDPILQELVD EWFKLDQDET TRNEVSQLIK AEDYATLKQI MHPRIGFGTS GLRAEIGAGF  60
   61 ARMNCLTVIQ ASQGFAEYLL QTVPSAAKLG VVIGHDHRHK SNTFARLTAA VFLQKGFKTY 120
  121 FFDHLVHTPL VPFAVKTLGT AAGVMITASH NPAAYNGYKV YWGNGCAIIP PHDKGIAACI 180
  181 EKNLTPITWD KNLVENHKLA DRDFAVGLLK NYWSQLHEFH SENNFSLEMK SLKFVYTPIH 240
  241 GVGLPFVTSA LHLFGEQGDM ISVPLQDSPN PDFPTVKFPN PEEEGALDLA YEQADANGIS 300
  301 YVLATDPDAD RFAFAEKING AWRRFTGDEV GCILAYFIFQ EYKNVGKPID DFYVLSTTVS 360
  361 SAMVKSMAKV EGFHHVETLT GFKWLGNKAL ELEKQGKFIG LAYEEALGYM VGSIVRDKDG 420
  421 VNALITFLHL LKRLQLQNLS ITEVFEQMSK KYGYYTTQNS YFLSRDTPKL RALVDALRHY 480
  481 DTKSGYPATL GSKKITNVRD LTTGYDSSST DGKATLPVSK SSDNVTFELE NGEVIMTIRT 540
  541 SGTEPKLKFY ICARGHSLED SIKNATEVKQ AIKSEWFHPQ QNGLEEP

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 108.0
Match: 1c47A
Description: Phosphoglucomutase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 1.61980820714401 bayes_pls_golite062009
intramolecular transferase activity, phosphotransferases 0.9938893438261 bayes_pls_golite062009
phosphomannomutase activity 0.96914970670646 bayes_pls_golite062009
catalytic activity 0.792640318995558 bayes_pls_golite062009
isomerase activity 0.340395019264179 bayes_pls_golite062009
phosphoglucomutase activity 0.268745464529951 bayes_pls_golite062009
protein binding 0.259532204752794 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle