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View Structure Prediction Details

Protein: SPBC947.07
Organism: Schizosaccharomyces pombe
Length: 233 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPBC947.07.

Description E-value Query
Range
Subject
Range
GL50803_4883 - | organism=Giardia_Assemblage_A_isolate_WB | product=hypothetical protein | location=GLCHR02:216520-...
gi|157433633, gi... - gi|71078504|ref|XP_771761.1| hypothetical protein GLP_546_74871_79250 [Giardia lamblia ATCC 50803], ...
ctg02_33|4883|Hy... - protein
143.0 [0..8] [196..382]
gi|7549210 - gi|7549210|gb|AAF63787.1|AF142406_1 200 kDa antigen p200 [Babesia bigemina]
124.0 [0..2] [232..455]
gi|85092801 - gi|85092801|ref|XP_959552.1| hypothetical protein NCU06090 [Neurospora crassa OR74A]
gi|32410929, gi|... - gi|32410929|ref|XP_325945.1| hypothetical protein [Neurospora crassa], gi|28920992|gb|EAA30316.1| pr...
106.0 [0..6] [221..270]
gi|23509114, gi|... - gi|23509114|ref|NP_701782.1| hypothetical protein PFL2110c [Plasmodium falciparum 3D7], gi|23496955|...
104.0 [0..5] [226..1385]
gi|21483596 - gi|21483596|gb|AAM52773.1| SD09607p [Drosophila melanogaster]
102.0 [0..7] [227..120]
gi|114581421 - gi|114581421|ref|XP_525949.2| PREDICTED: bromodomain adjacent to zinc finger domain, 2B [Pan troglod...
102.0 [0..16] [217..835]
gi|27374214 - gi|27374214|gb|AAO00978.1| Surf6-PA [Drosophila erecta]
101.0 [0..7] [227..100]
gi|46123935, gi|... - gi|46123935|ref|XP_386521.1| hypothetical protein FG06345.1 [Gibberella zeae PH-1], gi|42552119|gb|E...
101.0 [0..6] [215..305]
gi|83616161 - gi|83616161|gb|ABC25605.1| anonymous antigen-2 [Babesia bovis]
100.0 [0..3] [232..192]

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Predicted Domain #1
Region A:
Residues: [1-74]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 METTEGKNDL RAKLAEKIQT FRSQRKATEK VDRALLLQRR KEKAKARAEA KKLAKKESKA  60
   61 KQESKVAAYD TGNS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [75-233]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SDNIADEEND NHKSTITYGT LIVGDDKFSN GKLKVAGKKR GPTDVFGALK HLEAKKRRIE  60
   61 SMDEEKRRKI EESDKWHRVL LQAEGKKLKD NEQLLKKSIR RKEKEKKKSS DAWKERKDNE 120
  121 KKAMLMRQQR REENLKKRRE SKKSKKGKAP KKKKPSKKK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 3.30103
Match: 2i1jA
Description: No description for 2i1jA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle