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View Structure Prediction Details

Protein: SPBC947.07
Organism: Schizosaccharomyces pombe
Length: 233 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPBC947.07.

Description E-value Query
Range
Subject
Range
GL50803_4883 - | organism=Giardia_Assemblage_A_isolate_WB | product=hypothetical protein | location=GLCHR02:216520-...
gi|157433633, gi... - gi|71078504|ref|XP_771761.1| hypothetical protein GLP_546_74871_79250 [Giardia lamblia ATCC 50803], ...
ctg02_33|4883|Hy... - protein
143.0 [0..8] [196..382]
gi|7549210 - gi|7549210|gb|AAF63787.1|AF142406_1 200 kDa antigen p200 [Babesia bigemina]
124.0 [0..2] [232..455]
gi|85092801 - gi|85092801|ref|XP_959552.1| hypothetical protein NCU06090 [Neurospora crassa OR74A]
gi|32410929, gi|... - gi|32410929|ref|XP_325945.1| hypothetical protein [Neurospora crassa], gi|28920992|gb|EAA30316.1| pr...
106.0 [0..6] [221..270]
gi|23509114, gi|... - gi|23509114|ref|NP_701782.1| hypothetical protein PFL2110c [Plasmodium falciparum 3D7], gi|23496955|...
104.0 [0..5] [226..1385]
gi|21483596 - gi|21483596|gb|AAM52773.1| SD09607p [Drosophila melanogaster]
102.0 [0..7] [227..120]
gi|114581421 - gi|114581421|ref|XP_525949.2| PREDICTED: bromodomain adjacent to zinc finger domain, 2B [Pan troglod...
102.0 [0..16] [217..835]
gi|27374214 - gi|27374214|gb|AAO00978.1| Surf6-PA [Drosophila erecta]
101.0 [0..7] [227..100]
gi|46123935, gi|... - gi|46123935|ref|XP_386521.1| hypothetical protein FG06345.1 [Gibberella zeae PH-1], gi|42552119|gb|E...
101.0 [0..6] [215..305]
gi|83616161 - gi|83616161|gb|ABC25605.1| anonymous antigen-2 [Babesia bovis]
100.0 [0..3] [232..192]

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Predicted Domain #1
Region A:
Residues: [1-74]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 METTEGKNDL RAKLAEKIQT FRSQRKATEK VDRALLLQRR KEKAKARAEA KKLAKKESKA  60
   61 KQESKVAAYD TGNS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [75-233]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SDNIADEEND NHKSTITYGT LIVGDDKFSN GKLKVAGKKR GPTDVFGALK HLEAKKRRIE  60
   61 SMDEEKRRKI EESDKWHRVL LQAEGKKLKD NEQLLKKSIR RKEKEKKKSS DAWKERKDNE 120
  121 KKAMLMRQQR REENLKKRRE SKKSKKGKAP KKKKPSKKK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 3.30103
Match: 2i1jA
Description: No description for 2i1jA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle