Protein: | taf73 |
Organism: | Schizosaccharomyces pombe |
Length: | 642 amino acids |
Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for taf73.
Description | E-value | Query Range |
Subject Range |
|
518.0 | [0..44] | [642..1100] |
|
512.0 | [0..81] | [641..927] |
|
511.0 | [0..15] | [641..478] |
|
506.0 | [0..104] | [641..157] |
|
495.0 | [0..104] | [641..1085] |
|
493.0 | [0..60] | [641..873] |
Region A: Residues: [1-74] |
1 11 21 31 41 51 | | | | | | 1 MAQSSYSSGN STSDLNKIVL DYLFKKGYSR TEAMLRLEIS SVGAIPEEQQ DWHIGASETY 60 61 VQVYILLRDW IDGT |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [75-224] |
1 11 21 31 41 51 | | | | | | 1 LDLYKPKLQK VLYPIFVHSY LDLLQKNDPE MAIYFFESFR IEHEVLHGYD IRALAQLKIA 60 61 SDVEEIEIAQ LYRKNKYRIN FTRSTFDLLV QFLFENEVNG SGIIIRLLNQ YIDIKITMPQ 120 121 VEGKEDPNVQ AVYEMDEAKN EQTIISEQEG |
Detection Method: | |
Confidence: | 18.221849 |
Match: | 2j49A |
Description: | No description for 2j49A was found. |
Region A: Residues: [225-642] |
1 11 21 31 41 51 | | | | | | 1 IPGHSEQLLD YNKQSIQLGL RPLSEEVVTT LKNLLEVKDK DVEGRNEALN KILHPAKNLV 60 61 ELLTEKENLI NESTLESPSD PPLPPTKMKD IDYFVSLLES EQNSLILGKN ATDPSVFMYT 120 121 MHNTLSAVNC AAFSDDASMF ALGCADSSIH LYSSTNNGPQ PLVGSQNEPL QKSSLIGHTR 180 181 PVFGVSISPQ KEFILSCSED GFTRLWSKDT KSTIVKYAGH NAPIWDVQFS PFGYYFATAS 240 241 HDQTARLWDV EHAAPLRVFV GHQNDVDCVS FHPNAAYLAT GSSDHTTRMW DVRTGGTVRV 300 301 FNAHHSPVSA LCMSADGLSL ASADESGIIK VWDLRSSNQH VSFVKHSSIV YSLSFSYDNK 360 361 ILVSGGADTD VNFWDLTYRN NLSDGEQSPL LFNFKTKNTI IQNLSFTRRN YCLALSSS |
Detection Method: | |
Confidence: | 74.0 |
Match: | 1vyhC |
Description: | PAF-AH Holoenzyme: Lis1/Alfa2 |
Matching Structure (courtesy of the PDB): |
Term | Confidence | Notes |
6.67009948605948 | bayes_pls_golite062009 | |
general RNA polymerase II transcription factor activity | 5.61142954750278 | bayes_pls_golite062009 |
actin binding | 3.86142918698875 | bayes_pls_golite062009 |
acetyltransferase activity | 3.85374902981345 | bayes_pls_golite062009 |
RNA binding | 3.77273677738815 | bayes_pls_golite062009 |
acyltransferase activity | 3.35098520158193 | bayes_pls_golite062009 |
transferase activity, transferring acyl groups other than amino-acyl groups | 3.31615347567536 | bayes_pls_golite062009 |
GTPase activity | 3.23750443966606 | bayes_pls_golite062009 |
transferase activity, transferring acyl groups | 3.14917998298348 | bayes_pls_golite062009 |
cytoskeletal protein binding | 3.1056443224755 | bayes_pls_golite062009 |
tubulin binding | 2.76945430061825 | bayes_pls_golite062009 |
microtubule binding | 2.72684103222924 | bayes_pls_golite062009 |
dynein binding | 2.54821997913979 | bayes_pls_golite062009 |
binding | 2.42570478946173 | bayes_pls_golite062009 |
transcription regulator activity | 2.3610959773142 | bayes_pls_golite062009 |
nucleic acid binding | 2.30918780727915 | bayes_pls_golite062009 |
transcription initiation factor activity | 2.28847626309518 | bayes_pls_golite062009 |
snoRNA binding | 2.27164613239345 | bayes_pls_golite062009 |
protein binding | 2.26925404328312 | bayes_pls_golite062009 |
actin filament binding | 2.0735069176589 | bayes_pls_golite062009 |
dynactin binding | 1.85146647785657 | bayes_pls_golite062009 |
DNA binding | 1.71685536470455 | bayes_pls_golite062009 |
structural molecule activity | 1.47097979074281 | bayes_pls_golite062009 |
transcription activator activity | 1.23969853550045 | bayes_pls_golite062009 |
transporter activity | 1.21549336905926 | bayes_pls_golite062009 |
receptor activity | 1.12819778129653 | bayes_pls_golite062009 |
transcription factor activity | 1.08768505897883 | bayes_pls_golite062009 |
mRNA binding | 1.05053985350578 | bayes_pls_golite062009 |
microtubule plus-end binding | 1.01166033978052 | bayes_pls_golite062009 |
myosin binding | 0.989691178611801 | bayes_pls_golite062009 |
molecular transducer activity | 0.974380908248463 | bayes_pls_golite062009 |
signal transducer activity | 0.974380908248463 | bayes_pls_golite062009 |
protein transporter activity | 0.964340340346761 | bayes_pls_golite062009 |
substrate-specific transporter activity | 0.734793983890004 | bayes_pls_golite062009 |
histone binding | 0.685319917508843 | bayes_pls_golite062009 |
RNA polymerase II transcription factor activity | 0.676924760416604 | bayes_pls_golite062009 |
transcription repressor activity | 0.658573452658359 | bayes_pls_golite062009 |
transcription factor binding | 0.489473003915035 | bayes_pls_golite062009 |
dynein intermediate chain binding | 0.443846546939402 | bayes_pls_golite062009 |
insulin receptor binding | 0.43316396073854 | bayes_pls_golite062009 |
phosphotransferase activity, alcohol group as acceptor | 0.426429095658617 | bayes_pls_golite062009 |
kinase activity | 0.387572734234845 | bayes_pls_golite062009 |
myosin II binding | 0.33142771724387 | bayes_pls_golite062009 |
histone methyltransferase activity | 0.311523647180993 | bayes_pls_golite062009 |
transcription cofactor activity | 0.30761651528651 | bayes_pls_golite062009 |
nucleotidyltransferase activity | 0.28606552120995 | bayes_pls_golite062009 |
G-protein-coupled receptor binding | 0.251120087240234 | bayes_pls_golite062009 |
myosin heavy chain kinase activity | 0.231534552000461 | bayes_pls_golite062009 |
protein kinase activity | 0.229242350006544 | bayes_pls_golite062009 |
transferase activity, transferring phosphorus-containing groups | 0.226335610368636 | bayes_pls_golite062009 |
transcription corepressor activity | 0.182612389752591 | bayes_pls_golite062009 |
chromatin binding | 0.151977098745772 | bayes_pls_golite062009 |
structural constituent of cytoskeleton | 0.118975415284669 | bayes_pls_golite062009 |
receptor binding | 0.0390635451962911 | bayes_pls_golite062009 |
nucleoside-triphosphatase activity | 0.00585398682921312 | bayes_pls_golite062009 |