YRC Public Data Repository - Protein Structure Prediction

Protein:	SPCC16C4.12
Organism:	Schizosaccharomyces pombe
Length:	180 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPCC16C4.12.

Description	E-value	Query Range	Subject Range
gi\|38107007, gi\|... - gi\|39972427\|ref\|XP_367604.1\| conserved hypothetical protein [Magnaporthe grisea 70-15], gb\|EAA53238....	143.0	[0..1]	[178..1]
gi\|85099319 - gi\|85099319\|ref\|XP_960754.1\| N-acetyltransferase 5 [Neurospora crassa OR74A] gi\|32412578, gi\|... - gi\|38566809\|emb\|CAE76117.1\| related to N-acetyltransferase [Neurospora crassa], gi\|32412578\|ref\|XP_3...	143.0	[0..1]	[178..1]
gi\|46110048, gi\|... - gi\|46110048\|ref\|XP_382082.1\| hypothetical protein FG01906.1 [Gibberella zeae PH-1], gi\|42545821\|gb\|E...	139.0	[0..1]	[178..1]
gi\|20807038 - gi\|20807038\|ref\|NP_622209.1\| Acetyltransferase [Thermoanaerobacter tengcongensis MB4] gi\|20807038, gi\|... - gi\|20807038\|ref\|NP_622209.1\| acetyltransferase [Thermoanaerobacter tengcongensis MB4], gi\|20515525\|g...	138.0	[0..2]	[153..4]
gi\|47214624 - gi\|47214624\|emb\|CAG01465.1\| unnamed protein product [Tetraodon nigroviridis]	136.0	[0..1]	[179..1]
gi\|18976639, gi\|... - gi\|18976639\|ref\|NP_577996.1\| ribosomal protein s18 alanine acetyltransferase [Pyrococcus furiosus DS...	136.0	[0..1]	[164..17]
gi\|14521872, gi\|... - gi\|5459092\|emb\|CAB50578.1\| N-terminal acetyltransferase [Pyrococcus abyssi GE5], gi\|14521872\|ref\|NP_... gi\|5459092, gi\|7... - pir\|\|D75017 n-terminal acetyltransferase PAB1098 - Pyrococcus abyssi (strain Orsay), gi\|5459092\|emb...	134.0	[0..2]	[161..20]
gi\|167039151, gi... - gi\|167039151\|ref\|YP_001662136.1\| ribosomal-protein-alanine acetyltransferase [Thermoanaerobacter sp.... gi\|76797381, gi\|... - gi\|76797381\|ref\|ZP_00779704.1\| Ribosomal-protein-alanine acetyltransferase [Thermoanaerobacter ethan... gi\|241884906, gi... - gi\|241902652\|ref\|ZP_04787384.1\| ribosomal-protein-alanine acetyltransferase [Thermoanaerobacter broc... gi\|242230040, gi... - gi\|242258437\|ref\|ZP_04803241.1\| ribosomal-protein-alanine acetyltransferase [Thermoanaerobacter sp. ...	134.0	[0..2]	[153..3]
gi\|12052808 - gi\|12052808\|emb\|CAB66576.1\| hypothetical protein [Homo sapiens]	133.0	[0..1]	[179..1]
gi\|73991065 - gi\|73991065\|ref\|XP_534329.2\| PREDICTED: similar to N-acetyltransferase 5 isoform 1 [Canis familiaris...	133.0	[0..1]	[179..1]

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Predicted Domain #1

Region A:
Residues: [1-180]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTDTRKFKAT DLFSFNNINL DPLTETFNIS FYLSYLNKWP SLCVVQESDL SDPTLMGYIM  60
   61 GKSEGTGKEW HTHVTAITVA PNSRRLGLAR TMMDYLETVG NSENAFFVDL FVRASNALAI 120
  121 DFYKGLGYSV YRRVIGYYSN PHGKDEDSFD MRKPLSRDVN RESIRENGEN FKCSPADVSF 180
  181

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	26.39794
Match:	1yr0A
Description:	Crystal structure of phosphinothricin acetyltransferase from agrobacterium tumefaciens
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
N-acetyltransferase activity	6.09290029352595	bayes_pls_golite062009
N-acyltransferase activity	6.08913516066746	bayes_pls_golite062009
acetyltransferase activity	5.86411968036951	bayes_pls_golite062009
histone acetyltransferase activity	5.85159161781386	bayes_pls_golite062009
lysine N-acetyltransferase activity	5.85159161781386	bayes_pls_golite062009
acyltransferase activity	4.72881921515185	bayes_pls_golite062009
transferase activity, transferring acyl groups	4.70793039001114	bayes_pls_golite062009
transferase activity, transferring acyl groups other than amino-acyl groups	4.69837915971204	bayes_pls_golite062009
transferase activity	3.5778020729894	bayes_pls_golite062009
myristoyltransferase activity	3.50779447340192	bayes_pls_golite062009
glycylpeptide N-tetradecanoyltransferase activity	3.50779447340192	bayes_pls_golite062009
	3.29707445389818	bayes_pls_golite062009
catalytic activity	1.97933499002461	bayes_pls_golite062009
binding	1.07749536895426	bayes_pls_golite062009
nucleic acid binding	0.522132859536345	bayes_pls_golite062009
protein binding	0.098756769132141	bayes_pls_golite062009
transcription regulator activity	0.0766125702622449	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: