| Protein: | SPAC4F10.09c |
| Organism: | Schizosaccharomyces pombe |
| Length: | 860 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPAC4F10.09c.
| Description | E-value | Query Range |
Subject Range |
|
|
730.0 | [0..2] | [859..152] |
|
|
716.0 | [0..2] | [859..146] |
|
|
710.0 | [0..3] | [859..154] |
|
|
710.0 | [0..3] | [859..154] |
|
Region A: Residues: [1-638] |
1 11 21 31 41 51
| | | | | |
1 MATLYPKPKR GQKIIFNEEG EGTIDTKPQG VMFDPGVPWY NIPLPELHED KKFVNVDHVS 60
61 ELETRGLLLL KEDSERFSET LGHGTADKRM LQTLISSGTT SDRISALTLL VQESPIHAVK 120
121 ALETLLSICS KKSRNEATQA ITTLKDLFIG GLLPDRKLKY MKQQSCLGSK NVTDKHLMVW 180
181 AFESFLKSFY FKYIQIIEAL SFDALLFVKS QMVSTIYDLL KAKPEQEQNL LKLLINKLGD 240
241 KENKIASKAS YSILQLEASH PAMKLVITKE IERFIFAPST SRTSCYYTLI TLNQTVLTHK 300
301 QVDVANLLIE IYFVFFTKLL FALEKEEVAD APTLEKKSLQ SDSKNKKSQK RKKDEDLRKE 360
361 AEENVNSRVI SAVLTGVNRA YPFAEVNSEK FDKHMNTLFA ITHTASFNTS VQVLMLIFQA 420
421 SASRDFISDR YYKSLYESLL DPRLTTSSKQ SLYLNLLYKS LIIDNNIPRV RAFIKRMVQV 480
481 SAWQQPPLVT GLFHVMHQLV IATTALRSMF TNAEIHDFDG DEEEVFKDVE EDDVSEDQKV 540
541 DSDKDGKLSD KQSHSAYVVG NVSVSTKKEH LSYDGRKRDP QYSNADGSCL WEIHPFLNHF 600
601 HPTVSLLAKS LVYGEKILGK PNLSLHTLNH FLDKFAYR
|
| Detection Method: |  |
| Confidence: | 1.57 |
| Match: | 1gw5B |
| Description: | Adaptin beta subunit N-terminal fragment |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| RNA binding | 2.62914297393378 | bayes_pls_golite062009 |
| structural molecule activity | 2.41912877876968 | bayes_pls_golite062009 |
| binding | 2.32703786067369 | bayes_pls_golite062009 |
| protein binding | 1.3800948965226 | bayes_pls_golite062009 |
| nucleic acid binding | 0.118461769548431 | bayes_pls_golite062009 |
|
Region A: Residues: [639-860] |
1 11 21 31 41 51
| | | | | |
1 NPKKSAAARG HSIMQPLAGG LSKGYVPGST YSGVPMNSEQ FTSKKQEEIP VDELFFYRFF 60
61 NDKYIKGKQA RKTKVDRDEE GEIDEDEVWK ALVDSKPQLE MDEEESDFDS EEMDKAMTDM 120
121 GSDSEQSADE NDNESMASEE KPMFSDEENL SEIAHSEDEF DDTVDFFEDE NDLLPFNETD 180
181 DEEEIQTVDH SETHSHKKKK RKAIKDLPVF ADAESYAHLL EN
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| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
