| Protein: | SPAC20G4.05c |
| Organism: | Schizosaccharomyces pombe |
| Length: | 568 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPAC20G4.05c.
| Description | E-value | Query Range |
Subject Range |
|
|
654.0 | [0..5] | [568..29] |
|
|
649.0 | [0..5] | [568..14] |
|
|
644.0 | [0..5] | [568..23] |
|
|
633.0 | [0..5] | [568..59] |
|
|
633.0 | [0..5] | [568..22] |
|
|
628.0 | [0..1] | [568..40] |
|
|
627.0 | [0..1] | [568..25] |
|
Region A: Residues: [1-182] |
1 11 21 31 41 51
| | | | | |
1 MSKKLKDLPV SSTFTSNLPP DPLVPTVQAM KKADDRILHV PRFVEGGGLF TYLTPSLKAN 60
61 SQLLAYSPSS VKSLGLEESE TQTEAFQQLV VGSNVDVNKC CPWAQCYGGY QFGDWAGQLG 120
121 DGRVVSLCEL TNPETGKRFE IQVKGAGRTP YSRFADGKAV LRSSIREYLC CEALYALGIP 180
181 TT
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [183-308] |
1 11 21 31 41 51
| | | | | |
1 QALAISNLEG VVAQRETVEP CAVVCRMAPS WIRIGTFDLQ GINNQIESLR KLADYCLNFV 60
61 LKDGFHGGDT GNRYEKLLRD VAYRNAKTVA KWQAYGFMNG VLNTDNTSIL GLSIDYGPFG 120
121 FLDVYN
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.748 | a.46.1 | Methionine synthase domain |
| View | Download | 0.705 | d.87.2 | CO dehydrogenase flavoprotein C-terminal domain-like |
| View | Download | 0.651 | a.24.29 | Description not found. |
| View | Download | 0.650 | d.87.2 | CO dehydrogenase flavoprotein C-terminal domain-like |
| View | Download | 0.641 | d.87.2 | CO dehydrogenase flavoprotein C-terminal domain-like |
| View | Download | 0.636 | a.121.1 | Tetracyclin repressor-like, C-terminal domain |
| View | Download | 0.615 | a.25.1 | Ferritin-like |
| View | Download | 0.614 | a.22.1 | Histone-fold |
| View | Download | 0.601 | f.36.1 | Neurotransmitter-gated ion-channel pransmembrane pore |
| View | Download | 0.579 | a.7.1 | Spectrin repeat |
|
Region A: Residues: [309-486] |
1 11 21 31 41 51
| | | | | |
1 PSFTPNHDDV FLRYSYRNQP DIIIWNLSKL ASALVELIGA CDKVDDLQYM EQLHNSTDLL 60
61 KKAFAYTSEV FEKIVEEYKN IVQNDFYDLM FKRVGLPSDS SNKILITDLL QILEDYELDM 120
121 PNCFSFLSRN SPSSMENEEY AAKLMQACIC LNPNNERVRN ESVKAFTNWV GRYSEATK
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [487-568] |
1 11 21 31 41 51
| | | | | |
1 TQEDSSRLAS MKKVNPHFTL RNWVLEEVIK EAYIGKFELF KKVCKMAACP FEDTWGFSKE 60
61 EEDYLCYNTT PSKSQIQCSC SS
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.689 | N/A | N/A | a.7.6 | Ribosomal protein S20 |
| View | Download | 0.523 | N/A | N/A | a.7.14 | Description not found. |
| View | Download | 0.514 | N/A | N/A | f.1.4 | Bcl-2 inhibitors of programmed cell death |
| View | Download | 0.505 | N/A | N/A | a.2.18 | Description not found. |
| View | Download | 0.496 | N/A | N/A | a.71.2 | Helical domain of Sec23/24 |
| View | Download | 0.496 | N/A | N/A | f.1.4 | Bcl-2 inhibitors of programmed cell death |
| View | Download | 0.472 | N/A | N/A | a.8.11 | Description not found. |
| View | Download | 0.446 | N/A | N/A | a.77.1 | DEATH domain |
| View | Download | 0.385 | N/A | N/A | a.24.7 | FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP) |
| View | Download | 0.385 | N/A | N/A | a.71.2 | Helical domain of Sec23/24 |
