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View Structure Prediction Details

Protein: SPAC13G7.11
Organism: Schizosaccharomyces pombe
Length: 269 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPAC13G7.11.

Description E-value Query
Range
Subject
Range
gi|2130233 - gi|2130233|pir||S67440 hypothetical protein SPAC13G7.11 - fission yeast (Schizosaccharomyces pombe)
534.0 [0..1] [269..1]

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Predicted Domain #1
Region A:
Residues: [1-62]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNVLRTQKYW VNQFAINFAC RNTYVNPMFL RYFHCAVPRA ISQRALKPMD IPFLQCYIEP  60
   61 ID

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [63-269]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NTSFFLHPFK KIRFWWRYLF YGWWNLKKNQ FLIKRTFPDR DFSIAEIIQN ALKLHSGVNK  60
   61 ALANHDLQQL EELCTLRTAQ ILKQQALNQP KCIWKLEKHI SKPKLLNLSR AQADLKGEEF 120
  121 FVQAVVRLHT LQSLRTDKGS PKIEKPDIEN VVIQQRSWTS PIRWQLWGSV PSTPVNTVRK 180
  181 TLPDGQVTFV AKPSKKSFLK QLFSGKE

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 3.05
Match: 2cw9A
Description: Crystal structure of human Tim44 C-terminal domain
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle