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View Structure Prediction Details

Protein: SPAC13G7.11
Organism: Schizosaccharomyces pombe
Length: 269 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPAC13G7.11.

Description E-value Query
Range
Subject
Range
gi|2130233 - gi|2130233|pir||S67440 hypothetical protein SPAC13G7.11 - fission yeast (Schizosaccharomyces pombe)
534.0 [0..1] [269..1]

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Predicted Domain #1
Region A:
Residues: [1-62]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNVLRTQKYW VNQFAINFAC RNTYVNPMFL RYFHCAVPRA ISQRALKPMD IPFLQCYIEP  60
   61 ID

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [63-269]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NTSFFLHPFK KIRFWWRYLF YGWWNLKKNQ FLIKRTFPDR DFSIAEIIQN ALKLHSGVNK  60
   61 ALANHDLQQL EELCTLRTAQ ILKQQALNQP KCIWKLEKHI SKPKLLNLSR AQADLKGEEF 120
  121 FVQAVVRLHT LQSLRTDKGS PKIEKPDIEN VVIQQRSWTS PIRWQLWGSV PSTPVNTVRK 180
  181 TLPDGQVTFV AKPSKKSFLK QLFSGKE

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 3.05
Match: 2cw9A
Description: Crystal structure of human Tim44 C-terminal domain
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle