YRC Public Data Repository - Protein Structure Prediction

Protein:	mug64
Organism:	Schizosaccharomyces pombe
Length:	295 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for mug64.

Description	E-value	Query Range	Subject Range
gi\|109111484 - gi\|109111484\|ref\|XP_001102732.1\| PREDICTED: SH3-domain GRB2-like 2 [Macaca mulatta]	245.0	[0..23]	[295..205]
gi\|114623938 - gi\|114623938\|ref\|XP_520501.2\| PREDICTED: SH3-domain GRB2-like 2 [Pan troglodytes]	240.0	[0..23]	[295..190]
gi\|76647057 - gi\|76647057\|ref\|XP_598550.2\| PREDICTED: similar to SH3-containing GRB2-like protein 3 (SH3 domain pr...	229.0	[0..21]	[293..165]
gi\|109476698, gi... - gi\|109476698\|ref\|XP_001070855.1\| PREDICTED: similar to SH3-domain GRB2-like 2 [Rattus norvegicus], g...	228.0	[0..23]	[295..99]
gi\|73987130 - gi\|73987130\|ref\|XP_868495.1\| PREDICTED: similar to SH3-containing GRB2-like protein 1 (SH3 domain pr...	220.0	[0..23]	[293..1]
gi\|49097092, gi\|... - gi\|67539398\|ref\|XP_663473.1\| hypothetical protein AN5869.2 [Aspergillus nidulans FGSC A4], ref\|XP_41...	220.0	[0..24]	[293..394]

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Predicted Domain #1

Region A:
Residues: [1-295]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYSTLVNKIY KGVNDSTTFS FNATVSSITP FAKKTTHYLR TKIGSRVEEL SLPEDYVELE  60
   61 QQVDSLKEAY NLVLPIVETV EVDGYDYPTN FRDSITDFGK TVSGKVRNLG NLTPLEQTPL 120
  121 ASVGKNLEEK EAAAKPSRTL YNAISRAASE ATTKMGAGNP LSSAFGQISV LEEKVGNLQG 180
  181 ERDSAISKNF CEQVRAVLYP RFAEAHRVKA DVQDKRLQLE MAKLDVESAK PENLEHCKSA 240
  241 VRSAEDELNG AIEHAKILYE QILNKDYNTD LLRSIIKNQL KFHQDAAAAL SDITI

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	50.69897
Match:	1x03A
Description:	No description for 1x03A was found.

Predicted functions:

Term	Confidence	Notes
binding	1.05734682327737	bayes_pls_golite062009
protein binding	0.665187475688991	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: