YRC Public Data Repository - Protein Structure Prediction

Protein:	SPAC31A2.06
Organism:	Schizosaccharomyces pombe
Length:	542 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPAC31A2.06.

Description	E-value	Query Range	Subject Range
ATP25_NEUCR - ATPase synthesis protein 25, mitochondrial OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CB... gi\|28924180, gi\|... - gi\|32411367\|ref\|XP_326164.1\| predicted protein [Neurospora crassa], gi\|28924180\|gb\|EAA33335.1\| predi...	484.0	[0..29]	[516..71]
gi\|46121273, gi\|... - gi\|46121273\|ref\|XP_385191.1\| hypothetical protein FG05015.1 [Gibberella zeae PH-1], gi\|42551137\|gb\|E...	461.0	[0..27]	[516..56]
orf19.9923, orf1... - orf19.2387 CGDID:CAL0000816 Assembly 19, Contig19-10148 (13667, 15409) CDS, translated using codon t... ATP25_CANAL - ATPase synthesis protein 25, mitochondrial OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=AT...	410.0	[0..47]	[496..40]
gi\|44980838 - gi\|44980838\|gb\|AAS50721.1\| ABL050Wp [Ashbya gossypii ATCC 10895] gi\|44980838, gi\|... - gi\|45185180\|ref\|NP_982897.1\| ABL050Wp [Ashbya gossypii ATCC 10895], gi\|44980838\|gb\|AAS50721.1\| ABL05...	381.0	[0..10]	[478..6]
gi\|67900638, gi\|... - gi\|67900638\|ref\|XP_680575.1\| hypothetical protein AN7306.2 [Aspergillus nidulans FGSC A4], ref\|XP_41...	207.0	[0..38]	[273..62]
gi\|39949773, gi\|... - gi\|39949773\|ref\|XP_363225.1\| hypothetical protein MG08809.4 [Magnaporthe grisea 70-15], gb\|EAA51287....	185.0	[0..30]	[264..105]
ATP25_YEAST - ATPase synthesis protein 25, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) ... ATP25_YEAS2 - ATPase synthesis protein 25, mitochondrial OS=Saccharomyces cerevisiae (strain JAY291) GN=ATP25 PE=3... ATP25 - Mitochondrial protein required for the stability of Oli1p (Atp9p) mRNA and for the Oli1p ring format...	165.0	[0..42]	[248..45]
gi\|50411267, gi\|... - gi\|50411267\|ref\|XP_457031.1\| hypothetical protein DEHA0B01496g [Debaryomyces hansenii CBS767], gi\|49...	155.0	[0..32]	[542..45]
gi\|48728975, gi\|... - gi\|77461193\|ref\|YP_350700.1\| hypothetical protein Pfl01_4972 [Pseudomonas fluorescens Pf0-1], gi\|773...	153.0	[0..73]	[242..14]
gi\|126358248, gi... - gi\|126358248\|ref\|ZP_01715247.1\| iojap-like protein [Pseudomonas putida GB-1], gi\|126317013\|gb\|EAZ679... gi\|82738230, gi\|... - gi\|82738230\|ref\|ZP_00901067.1\| Iojap-related protein [Pseudomonas putida F1], gi\|82714726\|gb\|EAP4980...	152.0	[0..88]	[242..28]

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Predicted Domain #1

Region A:
Residues: [1-86]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPTYRFNYLR FNKLCVSFFR SKFDKRPFAS QKFPENLVPD NSSNDANSQP EEVSSKKPWY  60
   61 VDEKHNLFPK KAHFDAVALP PIPKGA

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2

Region A:
Residues: [87-222]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PNFLADVLNL LKKKYYATDL SFVNSPADSF WCDSDLILLA SCNCGSEVVS ATNGLLRLLK  60
   61 QKNVGPVNVD GLTSASRRKI LERRMRKRSN LSNRQLNTSE NNWTCLSIEN FGISIHVITK 120
  121 NFREYYKLDN IEHVKD

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	31.522879
Match:	2o5aA
Description:	No description for 2o5aA was found.

Predicted functions:

Term	Confidence	Notes
binding	0.903714723880344	bayes_pls_golite062009
nucleotidyltransferase activity	0.7315600789942	bayes_pls_golite062009
transferase activity, transferring phosphorus-containing groups	0.651528323690891	bayes_pls_golite062009
protein binding	0.325334122978198	bayes_pls_golite062009
transferase activity	0.212392916986958	bayes_pls_golite062009
catalytic activity	0.209725173901451	bayes_pls_golite062009

Predicted Domain #3

Region A:
Residues: [223-312]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ETLYSDLEHG KQSRVSLTSK STPDNSLPPN FINNHSNVFR RSFHTCNFSL KSAASLYCDT  60
   61 QDILLNVNSQ NLTSTLEKYK KMHLQNPNNF

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4

Region A:
Residues: [313-542]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SLDFTLSIFE RLRKDSSLQL TTKDINTLFS TIALSPTKLS MASKHSKNLV SERMLYLSLM  60
   61 YKSLVDLKTI DSFSLKLLFL KFMICSCMVK GESNFFLDNR IFLLERIMNR YGIPMTIDTF 120
  121 LLMQFILAKS NRWSEVWRRW DNLRKAGVVF NERLYNHVYL LAFESKNERV INYVLTNIFE 180
  181 DMVSQSPPIP ASKLMATSLK KCVQSLPEKY AHSFPSVRNY IAKMENSMTH

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: