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View Structure Prediction Details

Protein: meu6
Organism: Schizosaccharomyces pombe
Length: 651 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for meu6.

Description E-value Query
Range
Subject
Range
SLAP1_CLOTH - Cell surface glycoprotein 1 OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237 / NBRC 103400 ...
251.0 [0..1] [643..1379]
SLP1_CLOTM, SLAP... - (Q06852) Cell surface glycoprotein 1 precursor (Outer layer protein B) (S-layer protein 1), Cell sur...
237.0 [0..1] [601..773]
gi|39592304, gi|... - gi|39592304|emb|CAE75525.1| Hypothetical protein CBG23547 [Caenorhabditis briggsae], gi|187020927|em...
gi|157762282 - gi|157762282|ref|XP_001673483.1| Hypothetical protein CBG23547 [Caenorhabditis briggsae AF16]
233.0 [0..8] [648..960]
gi|37930527, gi|... - gi|37930527|gb|AAP74661.1| elicitor-like transglutaminase M81 [Phytophthora infestans], gi|23505399|...
232.0 [0..6] [651..607]
gi|33310026 - gi|33310026|gb|AAQ03243.1|AF414112_1 putative cell wall protein FLO11p [Candida albicans]
gi|68482880, gi|... - gi|68482880|ref|XP_714666.1| putative cell wall adhesin [Candida albicans SC5314], gi|46436253|gb|EA...
221.0 [0..2] [649..198]
gi|70878103 - gi|70878103|gb|EAN91386.1| trans-sialidase, putative [Trypanosoma cruzi]
gi|71648919 - gi|71648919|ref|XP_813237.1| trans-sialidase [Trypanosoma cruzi strain CL Brener]
218.0 [0..4] [651..714]
gi|88188037, gi|... - gi|88602575|ref|YP_502753.1| mucin 2, intestinal/tracheal [Methanospirillum hungatei JF-1], gi|88188...
207.0 [0..8] [650..1484]

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Predicted Domain #1
Region A:
Residues: [1-161]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSYEGREERP EQIAEPTFEN VSEHNEHDSG SAEAQVETLE VPLSNETDND DATENAVPAE  60
   61 VQAPEEPKEP ETVDNIDPAD DDPNSVAAPK VEEKKSKKKA KDEKPLTYTT GGYLYCRSNG 120
  121 LIPHVMKRYF YMLEGPMSMD LLDHYYKKHF HGTLQGNPTE P

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [162-265]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SLASEQMHDS DADSLFQSAN DHLNRIAKAT QDCRGLLFYS KSQSTSVPSG IINLTDAVSI  60
   61 EPGTGNKFTI NFNNGKSETL EALDPESKNT WITDLKNAIA KKKE

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 0.959
Match: 2dhkA
Description: No description for 2dhkA was found.

Predicted Domain #3
Region A:
Residues: [266-357]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TKDKIKELRA YNDTLKRLGK LAARSGPSAS ETFRYFLPML SNGRDAKKSS SKSHGGKQNN  60
   61 SVAKDGLFDF FQNMIKGKTP QNDTASPIDN ET

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [358-539]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SADPVDTTVE AQSVEVPENE TNQIPTTEEH FPATTEEVAP ASEEKPATGP AEESTSTQNV  60
   61 EQASTQNDNG TPIGQIADAI EEDVKGTAQS VEQAFIEETD IALPDIALPD VATPTADDQD 120
  121 PSTAATNEES VVSNEDRTSK KAGKKHHRHH KKKKGGNKRV FGFKLHKYAK PTKSVKTLQA 180
  181 DP

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [540-651]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SLEFAKAGFE IFPSNLSKKL SGLVQKKVHK KFDKDGRLKE ISQFSKTTIK PETPLTPTTT  60
   61 PTPRTAAQED PAEETTDALA SAEGENNQMP QVLETEAAPS IASEGRSITV NA

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.214 0.086 meiotic chromosome segregation a.27.1 Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
View Download 0.200 0.056 meiotic chromosome segregation f.14.1 Voltage-gated potassium channels
View Download 0.218 0.026 meiotic chromosome segregation a.24.10 Histidine-containing phosphotransfer domain, HPT domain
View Download 0.269 0.021 meiotic chromosome segregation a.71.1 Endoplasmic reticulum protein ERP29, C-domain
View Download 0.231 N/A N/A a.182.1 GatB/YqeY domain


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle